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SCNpilot_expt_300_bf_scaffold_17119_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1661..2152)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 163.0
  • Bit_score: 313
  • Evalue 1.60e-82
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 163.0
  • Bit_score: 307
  • Evalue 2.20e-81
Diaminopimelate epimerase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P949_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 163.0
  • Bit_score: 313
  • Evalue 1.10e-82

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GGCTGGCGCGACATCCCGCTCTCCGAGGAATTCCGCGACACCCGCTACATCGAATTGCAGGTCGGGCCGATCGACGCGCCGGTGCTGCACTCGCCCTCGGTGGTGAGCATGGGCAACCCGCATGCGATCTTCTGGGTCGACGACATCCACGCCTACGATCTCGAACGCTTCGGGCCGCTGCTCGAAAATCATCCGGTGTTTCCCGAGCGCGCCAACATCACGCTGGCGCAGATCGTCGATCGCGAGCATATCGCGATGCGCACCTGGGGACGCGGTGCAGGCCTGACCAGGGCGTGCGGCTCGGCGGCCTGCGCCACCGCGGTGGCGGCGGCGCGATTGAAGCGCACCGGCCGCGTGGTTCACATGACGCTGCCCGGCGGCGAACTCACCATCGAATGGCGCGAGAGCGACGATCATGTGCTGATGACCGGCCCCGCGGTGCTGGAATTCGAGGGCCGATTCGATCCAGCCGTGTTCGCGAACATCGCCTGA
PROTEIN sequence
Length: 164
GWRDIPLSEEFRDTRYIELQVGPIDAPVLHSPSVVSMGNPHAIFWVDDIHAYDLERFGPLLENHPVFPERANITLAQIVDREHIAMRTWGRGAGLTRACGSAACATAVAAARLKRTGRVVHMTLPGGELTIEWRESDDHVLMTGPAVLEFEGRFDPAVFANIA*