ggKbase home page

SCNpilot_expt_300_bf_scaffold_15233_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1421..2695)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent protease n=1 Tax=Afipia birgiae RepID=UPI0002DC7D89 similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 424.0
  • Bit_score: 817
  • Evalue 8.00e-234
  • rbh
clpX; ATP-dependent protease ATP-binding subunit ClpX similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 424.0
  • Bit_score: 814
  • Evalue 1.50e-233
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 424.0
  • Bit_score: 814
  • Evalue 5.60e-233

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAGCAAGGTCGGAACGGGCGACTCGAAGAACACTCTCTATTGCTCATTCTGCGGAAAGAGCCAGCACGAGGTCCGCAAGCTGATCGCGGGCCCGACGGTGTTCATCTGCGACGAGTGCGTCGAGCTGTGCATGGACATCATCCGTGAGGAGAACAAGTCCTCACTGGTGAAGTCGCGCGACGGGATTCCGACGCCGAAGGAAATCTGCAAGGTTCTGGACGATTACGTGATCGGCCAGCAGCACGCCAAGAAGGTGCTCTCGGTCGCGGTCCACAACCACTACAAGCGGCTCAACCATCAGACCAAGCACAACGATGTCGAGCTTGCGAAGTCGAACATCCTGCTGATCGGTCCGACCGGCTCGGGCAAGACGCTGCTGGCGCAGACGCTGGCGCGTATCCTCGACGTGCCGTTCACGATGGCGGACGCGACGACGCTGACCGAAGCCGGCTATGTCGGCGAGGATGTCGAGAACATCATCCTGAAGCTGCTGCAGGCGGCCGACTACAATGTCGAGCGTGCGCAGCGCGGCATCGTCTACATCGACGAGATCGACAAGATTTCGCGCAAGTCGGACAATCCCTCGATCACCCGCGATGTCTCGGGCGAGGGCGTGCAGCAGGCGCTGCTCAAGATCATGGAAGGCACGGTGGCGAGCGTTCCCCCGCAGGGCGGCCGCAAGCATCCGCAGCAGGAATTCCTGCAGGTGGACACCACCAACATCCTGTTCATCTGCGGCGGTGCGTTCGCCGGCCTTGAGAAGATCATCTCCTCGCGCGGCCGCACCACCTCGATCGGCTTCGCCGCCAACGTGCTCGCGCCGGAAGACCGCCGCACCGGCGAAATCTTCCGCGAGGTCGAGCCGGAGGATCTGTTGAAGTACGGTCTCATTCCGGAGTTCGTCGGCCGCCTGCCGGTCGTCGCCACGCTGGAAGACCTCGACGAGGCCTCGCTGAAGAAGATCCTGACCGATCCGAAGAACGCGCTGGTCAAGCAGTATCAGCGGCTGTTCGAGATGGAGAACGTGGAGCTGACCTTCGCCGACGAGGCGCTGGGCGCGGTGGCGCGCAAGGCGATCGAACGCAAGACCGGCGCGCGCGGATTGCGCTCCATCCTGGAAAGCATCCTGCTCGAAACCATGTTCGACCTTCCGGGTCTGGAAGGCGTCGAGGAGGTCGTGATCTCGCGCGAGGTGGTGGAGGCGACGGCCCGTCCGCTCTACATCTACGCCGATCGCGCCGATCGGGCGAACGAGACCAGCGCCAGCGCCTAA
PROTEIN sequence
Length: 425
MSKVGTGDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKSSLVKSRDGIPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQTKHNDVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAANVLAPEDRRTGEIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLEGVEEVVISREVVEATARPLYIYADRADRANETSASA*