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SCNpilot_expt_300_bf_scaffold_15268_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 3..473

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI0002F17D01 similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 156.0
  • Bit_score: 296
  • Evalue 1.80e-77
Uncharacterized protein {ECO:0000313|EMBL:EKS36456.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 156.0
  • Bit_score: 296
  • Evalue 2.50e-77
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 156.0
  • Bit_score: 270
  • Evalue 2.90e-70

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GACGGGCGCGCGCTGATTGCCGTGCGCGATCATTATCTCTCCGCCGAGATCATGGGCATCAACCTCACCAAATACCGCACGCTGTCGTTCGGCCTCGCCGCGTTCTTCGCCGGCGTCGGCGGCGCTCTCTATGCGCACTACAATCAGGTGGTTTCCAACGAAGGCTTCGGCATCGACCGCTCGATCATCTTCCTTGCGGTGATCATCATCGGCGGCCTCGGCTCAATCATGGGCACGCTGATGGGCACCGCCTTCATGGTGCTGGTGCCGGAATCGATGGAATGGCTGAGCGCGGCTCTGAGCGGCAGCGCGATCGATCACGCCCTCGGGCTCAAGACCAACATCTCTTTCTTGCGCGAGATGTCCATCGGCATCATCATCATCATCTTCCTGATCTTCGAGCCGGATGGCCTCGCCCATCGCTGGCGACAGATCAAGGCTTACTGGAAACTCTACCCGTTCTCGCATTGA
PROTEIN sequence
Length: 157
DGRALIAVRDHYLSAEIMGINLTKYRTLSFGLAAFFAGVGGALYAHYNQVVSNEGFGIDRSIIFLAVIIIGGLGSIMGTLMGTAFMVLVPESMEWLSAALSGSAIDHALGLKTNISFLREMSIGIIIIIFLIFEPDGLAHRWRQIKAYWKLYPFSH*