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SCNpilot_expt_300_bf_scaffold_14323_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(185..910)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator PetR n=2 Tax=Bradyrhizobiaceae RepID=F7QFB2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 241.0
  • Bit_score: 415
  • Evalue 4.00e-113
  • rbh
DNA-binding response regulator PetR {ECO:0000313|EMBL:EGP10112.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bact similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 239.0
  • Bit_score: 414
  • Evalue 1.20e-112
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 241.0
  • Bit_score: 407
  • Evalue 3.10e-111

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
GTGAGCGAAACCGCGACATCCGCGCGCGGGCGGCCACGCCCCGCCGACGATGCACCGCATCTGCTGCTGGTCGATGACGACCGCCGCATCCGCGATCTGCTGTCGCGCTTTCTCGGCAATGAAGGCTATCGCGTCACCACCGCGAAAAGCGCGGCCGATGCCCGCGCCAAGCTGGGCGGTCTGCATTTCGACCTTTTGATTCTCGATGTGATGATGCCCGGCGAAACCGGCTTCGAACTGGCGCGCTTCATCCGCACCTCGTCCACGGTGCCGATCGTGATGTTGACCGCACGTCACGAGGCGGAAAACCGGATCGAGGGATTGCAGATCGGCGCCGATGATTATGTCGCCAAGCCGTTCGAGCCCCGCGAACTGGTGCTGCGTATCGCCAACATCCTCAAGCGTGCCGCGCCGGTGGCGACGCCTGCGCCGGAATCGGTGGCGTTCGGACCTTATGTCTATCATCTGGAGCGCGGCGAACTGCGGAGCGGCGAGGAGATCGTGCATCTCACCGACCGGGAGCGCGAGATGTTGCGCATTCTTGCCGCGAGCCCTGGCGAAACGGTGCCGCGCGCCGACCTCACCGGCGCAAGCGGTACGGTCAACGAGCGCGCGGTCGATGTGCAGATCAACCGTCTGCGCCGCAAGATCGAGCGCGATCCGGCCAACCCGCTGTTCCTGCAAGCGGTGCGCGGCATCGGCTATCGCCTCGTTGCCTCGCCATGA
PROTEIN sequence
Length: 242
VSETATSARGRPRPADDAPHLLLVDDDRRIRDLLSRFLGNEGYRVTTAKSAADARAKLGGLHFDLLILDVMMPGETGFELARFIRTSSTVPIVMLTARHEAENRIEGLQIGADDYVAKPFEPRELVLRIANILKRAAPVATPAPESVAFGPYVYHLERGELRSGEEIVHLTDREREMLRILAASPGETVPRADLTGASGTVNERAVDVQINRLRRKIERDPANPLFLQAVRGIGYRLVASP*