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SCNpilot_expt_300_bf_scaffold_22330_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..186

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 61.0
  • Bit_score: 128
  • Evalue 3.50e-27
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 61.0
  • Bit_score: 111
  • Evalue 1.20e-22
3-isopropylmalate dehydratase small subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX11_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 61.0
  • Bit_score: 128
  • Evalue 2.50e-27

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
CTGACCATCGATCTCGAGAAGCAGGAAATCCGCGGCCCCGACGGCGGCACGATCAAGTTCGAGATCGATCCGTTCCGCAAGCACTGCATGCTCAACGGCCTCGACGACATCGGCCTGACCATGGAAAAAGGCAAGTCGATCGACGTGTTCGAGGCGAAGGAAAAAGCCGAACGGCCCTGGCTGTAG
PROTEIN sequence
Length: 62
LTIDLEKQEIRGPDGGTIKFEIDPFRKHCMLNGLDDIGLTMEKGKSIDVFEAKEKAERPWL*