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SCNpilot_expt_300_bf_scaffold_17543_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2039..2404)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 123.0
  • Bit_score: 176
  • Evalue 2.90e-41
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMI2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 123.0
  • Bit_score: 176
  • Evalue 2.10e-41
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 136.0
  • Bit_score: 168
  • Evalue 1.60e-39

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ACCGAGCGCGGCGGCTCTGTCACCGTCTCGGCGGCGGTCGAGGGCTCGCGCCTCGCGCTGCGCGTCACCGATACCGGCGTCGGCATCAGCGCGGACGATCTCAAGCGGCTGGGCGATCCGTTCTTCCAGGCCGGCAAGACCTATCAGCGCCGTCACGAGGGCACCGGCCTCGGCCTGTCGATCGTGAAAAGCCTGGTCGCGCTGCATGGCGGCGAGATGACGGTGCAAAGCCGGATCGACGAGGGCACCATGGTGTGCGTCGCGCTGCCTCTGACCTTTACGCCGGCGAAGTCCGGCACGATTGCAACGCTCGCTCCCGCGCCGCGCGCGGAGGCGAAAGAAACTGCGGTGAAGAAAATTGCCTAG
PROTEIN sequence
Length: 122
TERGGSVTVSAAVEGSRLALRVTDTGVGISADDLKRLGDPFFQAGKTYQRRHEGTGLGLSIVKSLVALHGGEMTVQSRIDEGTMVCVALPLTFTPAKSGTIATLAPAPRAEAKETAVKKIA*