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SCNpilot_expt_300_bf_scaffold_23502_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(3..1184)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKN8_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 394.0
  • Bit_score: 711
  • Evalue 3.40e-202
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 394.0
  • Bit_score: 711
  • Evalue 4.70e-202
secD; preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 394.0
  • Bit_score: 700
  • Evalue 2.20e-199

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGCTGTACTTCACCCGCTGGAAAGCGCTCGCGGTCGTGCTCACCGCGTTCGTGGTGTGCCTGTGCGCCGTTCCGAACTTCTTCTCCGAGGCGACTGTGAAGACCTGGCCGAACTGGGCGCAGCGCCGCCTGGTGCTGGGCCTCGATTTGCAGGGCGGCTCCCACATCCTGCTCGAAGTCGACGCCAATTCGGTCAAGAAAGACAAGCTCGATCAGGTCCGTGACGACGTTCGCCGCACCTTGCGTGACGCCAAGATCGGTTACACCGGCCTTGGCGTGAAGGGCGACAATGTCGAGGTGCGCGTCAAGGAGGCCGATCAGGCGACCGCGCTCTCCAAGCTCCGCGAATTGTCGCAGCCCCTCGGTGGTCTGCTCGGCAGCAGCGGCCAGCGCAGCGTCGAGGTGTCCGATGCGGGCGGCGGCCTGATCCGGCTGAGCGTGCCGCAGGCGGCGATCAACGATCGGCTGCGTCAGGCGGTCGAGCAGTCGATCCAGATCATTGAAAGGCGCGTCAACGAACTCGGCACCGTGGAGCCGCTGATCCAGCGGCAGGGTCTCGACCGCGTCCTGGTGCAGGTGCCGGGTCTGCAGGATCCGACGCGGCTGAAGGAAATTCTTGGCAAGACGGCGAAGATGGACTTCCGCATGGTGGACACCACGGTGTCGCCGGAAGACGCGCTGCAGGGCCGGGTGCCGTCAGACTCCGAAGTCCTGCGCGGCATGGAAGCACCGCATGTGCCTTATGTGGTGAAGAAGCAGGTGCTGGTGTCCGGCGCCGATCTCACCGACGCGCAGCCGGGCTTCGACCAGCGCAACGGCCAGCCGATCGTCTCGTTCAAGTTCAATACCTCGGGTGCGCGCAAATTCGCCATCGCCACCACCGAGAACGTCAAGCAGCCTTTCGCGATCATCCTCGATAACGAGGTGATCTCGGCGCCCGTGATTCAGGAGCCGATCACCGGCGGCTCTGGCCAGATCTCCGGCAATTTCACCGTGCAGCAGGCCAACGATCTTGCGATCCTGCTGCGTGCCGGCGCGCTGCCGGCGCCGCTGACCATCATCGAGGAACGCACTGTCGGTCCCGGTCTCGGTCAGGACTCGATCGCGGCCGGCGAGCTGGCGTCCTATGTCGGCTCGATCCTCGTGATCGTGTTCATGACGCTGACCTATCGTCTGTTCGGC
PROTEIN sequence
Length: 394
MLYFTRWKALAVVLTAFVVCLCAVPNFFSEATVKTWPNWAQRRLVLGLDLQGGSHILLEVDANSVKKDKLDQVRDDVRRTLRDAKIGYTGLGVKGDNVEVRVKEADQATALSKLRELSQPLGGLLGSSGQRSVEVSDAGGGLIRLSVPQAAINDRLRQAVEQSIQIIERRVNELGTVEPLIQRQGLDRVLVQVPGLQDPTRLKEILGKTAKMDFRMVDTTVSPEDALQGRVPSDSEVLRGMEAPHVPYVVKKQVLVSGADLTDAQPGFDQRNGQPIVSFKFNTSGARKFAIATTENVKQPFAIILDNEVISAPVIQEPITGGSGQISGNFTVQQANDLAILLRAGALPAPLTIIEERTVGPGLGQDSIAAGELASYVGSILVIVFMTLTYRLFG