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SCNpilot_expt_300_bf_scaffold_22873_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 341..1306

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 316.0
  • Bit_score: 590
  • Evalue 1.30e-165
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 316.0
  • Bit_score: 573
  • Evalue 4.30e-161
serine hydroxymethyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002D99954 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 316.0
  • Bit_score: 591
  • Evalue 5.40e-166

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGAGCTCATCTGCCAATTCTTCCAGCGTGAAGACTGCGTCCGCTCCCGACTCGTTCTTCACGGCCTCCCTCGCGCAGGCCGATCCGGAGATCGCCGCCGCGATCAAGGGTGAACTCGGTCGCCAGCAGCATGAGATCGAACTGATCGCCTCGGAGAACATCGTCAGCCGCGCCGTGCTCGAGGCGCAGGGTTCGGTGATGATCAACAAGTACGCCGAGTGCTATCCGGGCGCGCGCTACTACGGTGGCTGCGAGTTCGTTGACGTCGCCGAAACGCTCGCCATCGAACGCGCCAAGAAGCTGTTCGGCGCGAACTTCGCCAATGTGCAGCCGAACTCCGGCAGCCAGATGAATCAGGCCGTATTCCTCGCGCTGCTGCAGCCGGGCGACACTTTCATGGGTCTCGATCTTGCCGCGGGCGGCCATCTCACCCACGGCGCGCCGGTCAACATGTCCGGCAAGTGGTTCAAGCCGGTGCACTACACCGTGCGCCGCGAGGACCAGTTGATCGATATGGACGCGGTGGCGAAGCAGGCGGAAGAGGTGAAGCCGAAGCTGATCATCGCCGGTGGTTCGGCCTATTCGCGCCCGTGGGACTTCAAGCGCTTCCGCGAGATCGCCGATAGCGTCGGTGCGTATCTGCTGGTGGATATGGCGCACTTTGCCGGCCTCGTGGCGGGCGGCGTCCATGCCTCGCCGGTGCCGCATGCGCATGTCACCACCACCACCACGCACAAGTCGCTGCGCGGCCCGCGCGGCGGCCTGATCCTCACGAACGACGAAGCGCTGCATAAGAAGCTGAACTCGGCGATCTTCCCCGGCCTGCAGGGCGGTCCGCTGATGCATGTCATCGCCGCGAAGGCCGTGGCGTTCAAGGAAGCGCTGCAGCAGGACTTCAAGATTTACGCGAAGAACGTGGTCGAAAACGCGAAGGCGCTTGCGGAAACCCTGCGCGCCAACGGCTTT
PROTEIN sequence
Length: 322
MSSSANSSSVKTASAPDSFFTASLAQADPEIAAAIKGELGRQQHEIELIASENIVSRAVLEAQGSVMINKYAECYPGARYYGGCEFVDVAETLAIERAKKLFGANFANVQPNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHGAPVNMSGKWFKPVHYTVRREDQLIDMDAVAKQAEEVKPKLIIAGGSAYSRPWDFKRFREIADSVGAYLLVDMAHFAGLVAGGVHASPVPHAHVTTTTTHKSLRGPRGGLILTNDEALHKKLNSAIFPGLQGGPLMHVIAAKAVAFKEALQQDFKIYAKNVVENAKALAETLRANGF