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SCNpilot_expt_300_bf_scaffold_19587_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1194..1460

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 180
  • Evalue 1.10e-42
trpS; tryptophan-tRNA ligase TrpS (EC:6.1.1.2) similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 89.0
  • Bit_score: 156
  • Evalue 2.70e-36
Tryptophan--tRNA ligase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0I0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 180
  • Evalue 8.00e-43

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCTGCAAAAGAACTGGTGTTTTCGGGCGTCCAGCCGACGGGCAATCTGCATCTCGGCAATTACCTCGGCGCCATCGTCAATTTCGTCAAGCTCCAGAACCCCCACAACTGCATCTATTGCGTTGTGGACCTGCACGCCATCACCGTCTGGCAGGACCCGGCCGAACTGACCCGCACCATCCGCGAGGTCACCGCCGCGTTCATTGCCGCCGGCATCGATCCGAAGAAGCACATCGTGTTCAACCAGAGTCAGGTCTCCGAGCAC
PROTEIN sequence
Length: 89
MAAKELVFSGVQPTGNLHLGNYLGAIVNFVKLQNPHNCIYCVVDLHAITVWQDPAELTRTIREVTAAFIAAGIDPKKHIVFNQSQVSEH