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SCNpilot_expt_300_bf_scaffold_19851_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 3..1142

Top 3 Functional Annotations

Value Algorithm Source
carnitine dehydratase n=1 Tax=Afipia birgiae RepID=UPI0002D651A6 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 376.0
  • Bit_score: 679
  • Evalue 2.30e-192
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40332.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 373.0
  • Bit_score: 679
  • Evalue 3.30e-192
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 373.0
  • Bit_score: 513
  • Evalue 4.80e-143

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
CAGGGAAACGACATCATGCGGGGTCCGCTCGCCGGAATTAAGGTCATCGAAATCGGGCAGGCGCTCGCCGGTCCGCTGGCCGGCGCGATCATGGCCGACATGGGCGCGGACGTGATCAAGATCGAGAAGCCCGACGGCGGCGATGATGCGCGCGGGTGGGGGCCTCCGTTCATCGAGGAGGCCTCGATCATGTTTCACGTCACCAACCGCAACAAGCGGTCGGTGACCATCGACATGAAGAACGCCGCCGGGATCGAGAAGCTCAAGACGCTGGTGCGCGACGCCGATATCCTGATCCAGAACCTGCGTTCGGGCGTGGTGGGCGATCTCGGCATCGGCCCGGACGACATGCGCGCGATTAATCCGCGTCTGATCTATTGTTCGATCTGGGCGTTCGGCCGCAACGGCCCGCTCGCGAAAGCGCCGGGCTTCGATCCGCTGCTGCAGGCGTTCGGCGGCGTGATGATGCAGACCGGCCGCCACGACGATCCGCCGACATTCTGCGCGCCCGCCATCAACGACAAGGCCACCGCGCAATGGTGCGTGATCGGCGCGCTGGCCGCGCTTCAGCAGCGGCAGGTGACGGGACAGGGCTGCGTGATCGACACCTCGCTGCTCGACAGCGCCGCATCCTGGGTGGACTCATCGCTCGCGACCTATCACGTCACCGGCGAACTGTCGCAGCGCACCGGCGCGGCGACGCCTGCGATTGTGCCGTATCAGGCGTTCGAGACCGCCGATCGTCCGATGGTGATCGCTGCCGGTTACGACCGTTTGTTTCATAAGCTCGCGGCCGTGCTCGGACAGCCGGACTGGGCGACCGATCCGAGGTTTGCGCGGGGCAGGGACCGCATTGCCAATCGCGATGTCCTGCTTGGCTTGATGAAGCCGATCCTGCTGACAAGGACCTGCGCCGAATGGCTCGCGGCGTTCGAGAACGTCGGCGTGCCGTGCAGTCCGGTCAACACCATCGCGGAACTGGAGCAGACCGAACAGTTCAAGGCCTCCGATCTGCTGCGCGTCCTGCCGGGCAGCGATCTGCCGGTGGTCGGTTTGCCGATCTCGTTCGACGGGCAGCGTCCGCGCCCGCACTCCGGCGCGCCGCGTCTCGGCCAACACAACGATGAGTTGTTGAGATAG
PROTEIN sequence
Length: 380
QGNDIMRGPLAGIKVIEIGQALAGPLAGAIMADMGADVIKIEKPDGGDDARGWGPPFIEEASIMFHVTNRNKRSVTIDMKNAAGIEKLKTLVRDADILIQNLRSGVVGDLGIGPDDMRAINPRLIYCSIWAFGRNGPLAKAPGFDPLLQAFGGVMMQTGRHDDPPTFCAPAINDKATAQWCVIGALAALQQRQVTGQGCVIDTSLLDSAASWVDSSLATYHVTGELSQRTGAATPAIVPYQAFETADRPMVIAAGYDRLFHKLAAVLGQPDWATDPRFARGRDRIANRDVLLGLMKPILLTRTCAEWLAAFENVGVPCSPVNTIAELEQTEQFKASDLLRVLPGSDLPVVGLPISFDGQRPRPHSGAPRLGQHNDELLR*