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SCNpilot_expt_300_bf_scaffold_18432_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 2..850

Top 3 Functional Annotations

Value Algorithm Source
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 282.0
  • Bit_score: 488
  • Evalue 8.00e-135
prpB; methylisocitrate lyase PrpB (EC:4.1.3.30) similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 280.0
  • Bit_score: 486
  • Evalue 6.10e-135
Methylisocitrate lyase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8U6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 282.0
  • Bit_score: 488
  • Evalue 5.70e-135
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
AAGCGTCCAGGCATTCTGCAAATCCCCGGCGCGCATAACGGCATGGCGTCGATCCAGGCGCGCGATGCCGGGTTTGACGCGCTCTATCTGTCGGGCGCGGCGATGACCGCGTCGATGGGATTGCCGGACCTCGGCATGATCACGGTGGACGAGGTCTGCTTCTTCGTCCGTCAGGTCGCGCGGGCCAGCAGCCTTCCCGTGCTGGTCGACGGCGATACCGGCTATGGCGAGGCGCTCAATGTCATGAACATGGTGCGCGCCTTCGAGGATGCCGGCGCCGGCGCGGTCCATATCGAGGACCAGTTGCTGCCGAAGAAATGCGGCCATCTCAACGACAAGAAGCTGGCCGATCCGCGCGACATGGCGGCCAAGGTGGCGGCGGCGGTGAAGGCGCGGCGCCATCTGTTTGTCATCGCCCGCACCGACGCGGCGGCGAGCGAGGGCATCGACGGCGCGGTGGCGCGCATCAAGCTTTACCTTGAGGCCGGCGCGGACGCGATCTTCCCCGAGGCGCTGACCTCGCGCGAGATGTTCCAGGAAGTCGCCAGGCGTCTGCCGGGCGTGCCGCTGCTCGCCAACATGACCGAGTTCGGCAAGACGCCGTTCATCACCGCTTCCGAATTCGAGGCGATGGGTTATCGCATGGTGATTTGGCCGGTGTCCTCGCTGCGCGTCGCCAACAAGGCGCAGGAAAAGCTCTATGCCACGCTGAAGAAGAATGGCAGCACCGAGGCGGCGGTTCCCGACATGCAGACCCGGGCCGAGCTTTATGCCACCATCCGGCTTCATGATTACGAGGCGCTGGACGCCTCGATCGTGGAAACCATCGTTCCGCGCGCCGCCGAGTAG
PROTEIN sequence
Length: 283
KRPGILQIPGAHNGMASIQARDAGFDALYLSGAAMTASMGLPDLGMITVDEVCFFVRQVARASSLPVLVDGDTGYGEALNVMNMVRAFEDAGAGAVHIEDQLLPKKCGHLNDKKLADPRDMAAKVAAAVKARRHLFVIARTDAAASEGIDGAVARIKLYLEAGADAIFPEALTSREMFQEVARRLPGVPLLANMTEFGKTPFITASEFEAMGYRMVIWPVSSLRVANKAQEKLYATLKKNGSTEAAVPDMQTRAELYATIRLHDYEALDASIVETIVPRAAE*