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SCNpilot_expt_300_bf_scaffold_24810_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2..325)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNA6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 108.0
  • Bit_score: 181
  • Evalue 4.30e-43
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS39833.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 108.0
  • Bit_score: 181
  • Evalue 6.10e-43
mdtA2; multidrug resistance protein MdtA similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 108.0
  • Bit_score: 136
  • Evalue 3.50e-30

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGCTCTTTAAGCCCGACCTCAATGACAAGGCCAAAGCCGCAGGCGATGGTGTCGCGCGCGCGGCATCCGGCGCGCGGCGGCGGACTGTATCGATCGCGGTATGGCTCGTGATCCTCGGCGGTCTCGGCTATCTCGGCTGGACGTATTTTCACGGCAGCAGCCAGACCGCCACGCGCGGGCCGCGCCCGGACATGGCGATCCCGGTGCTGGCGGCGACGCCGCGCATCGAAGACGTGCCGGTCTATCTCGACGGCGTCGGCACCGTGCGCGCGCTCAACAACGTGACGGTGCGCGCGCAGGTCAGCGGCAAGCTGCTATCGGTG
PROTEIN sequence
Length: 108
MLFKPDLNDKAKAAGDGVARAASGARRRTVSIAVWLVILGGLGYLGWTYFHGSSQTATRGPRPDMAIPVLAATPRIEDVPVYLDGVGTVRALNNVTVRAQVSGKLLSV