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SCNpilot_expt_300_bf_scaffold_24810_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(315..1226)

Top 3 Functional Annotations

Value Algorithm Source
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGS8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 303.0
  • Bit_score: 515
  • Evalue 2.70e-143
  • rbh
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:EKS39989.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 303.0
  • Bit_score: 515
  • Evalue 3.80e-143
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 294.0
  • Bit_score: 448
  • Evalue 1.20e-123

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
GCCTATTTCACCGTGATCGCATCGCAGGACCGGATCGCCATCGCCACGCGGAATATCGCCAGCGCGCAGCGAATCTACGACGCCATCAAGGCGCGCGTCGATGCGGGCACTGGGTCCGATCTCGATCTGGCGCAGCAGGAAAGCGTGCTCGCCAATCAGAAGGCATCGGTGCCGCCGCTGCGGCAGGCGCTGGCGCAGAACAGCAACGTGCTGGCCACGCTGGTGTCGCGGCCGCCGGAGCGCATGCGGCTGAGGGGCGGAACGCTGGGCGCGATAGCCCTGCCGCCCGTGACGCCGGGACTGCCGTCCGAACTGCTGACCCAGCGTCCTGACATTCGCCGTCAGGAAAGCGATCTGGCGTCTGCGACCGCCAATGTCGGCAGCGCCCGGGCGCAGTTCTTTCCGAGCATCCAGCTGACGGCATCCGGCGGCTACCAGAGCGCGGCGCTCGCGGCTCTGTTCACGCCGCAATCGGCGTTCTTCAACATGGCGGCGGGGCTGACCCAGCCGATCTTCGACGCAGGGCGGATCCAGGCCAATTTCGACCTGATGCAGGCGCGGCAGGACGAAATGCTGCAGACCTATCGCAAGACGGTCATTTCCGCCTTCTCCGATGTGGACACGGCGCTGACGACCCTGAAGGAAGCCAACGAGCGGGTCCGGCTGCAGCGTATCGTGGTGACATCGTCGCGGCGGGCGTTCGAATTGTCGGAGCGGCAGCTTCGCGCCGGTACGGCCGACATCGTGACTGTGCTAAACACGCAATTGACGCTCTTTCAGGCCGAGGATTCGCTGGCGCAATACCAGTTGGCCCGGCTGCTGGCTGTCGTCACCCTCTATCAGGCATTGGGCGGCGGCTGGTCGCCCGGAGTGCCGCCAAGGATAACGGAAGGGGCCGCGGATGCTCTTTAA
PROTEIN sequence
Length: 304
AYFTVIASQDRIAIATRNIASAQRIYDAIKARVDAGTGSDLDLAQQESVLANQKASVPPLRQALAQNSNVLATLVSRPPERMRLRGGTLGAIALPPVTPGLPSELLTQRPDIRRQESDLASATANVGSARAQFFPSIQLTASGGYQSAALAALFTPQSAFFNMAAGLTQPIFDAGRIQANFDLMQARQDEMLQTYRKTVISAFSDVDTALTTLKEANERVRLQRIVVTSSRRAFELSERQLRAGTADIVTVLNTQLTLFQAEDSLAQYQLARLLAVVTLYQALGGGWSPGVPPRITEGAADAL*