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SCNpilot_expt_300_bf_scaffold_25229_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 958..1209

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=RS13_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 84.0
  • Bit_score: 161
  • Evalue 2.80e-37
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; RRP-S13; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 84.0
  • Bit_score: 161
  • Evalue 6.60e-37
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 84.0
  • Bit_score: 160
  • Evalue 2.30e-37

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
GTGGCCCGTATCGCAGGCGTCAACATCCCGACCAACAAGCGCGTGCTGATCGCGCTTCAGTATATTCACGGCATCGGCCAGAAGAATGCCGCCGACATTCTCGAGAAGGTCAAGATCCCGGTGGACCGCCGGGTCAACCAGCTTTCCGACCAGGAAGTGCTGCAGATCCGCGAAGTGATCGACCGCGACTATCTCGTCGAGGGCGACCTGCGCCGCGAGACCGGCATGAACATCAAGCGTCTGATGGACCTC
PROTEIN sequence
Length: 84
VARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPVDRRVNQLSDQEVLQIREVIDRDYLVEGDLRRETGMNIKRLMDL