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SCNpilot_expt_300_bf_scaffold_25235_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(44..1210)

Top 3 Functional Annotations

Value Algorithm Source
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLP2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 387.0
  • Bit_score: 656
  • Evalue 2.20e-185
  • rbh
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS42506.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 387.0
  • Bit_score: 656
  • Evalue 3.00e-185
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 389.0
  • Bit_score: 653
  • Evalue 3.00e-185

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
GAAAAGCCGGAGCAATTCGTCGTCGTCGACGACAACACCGTGCGGGTCGATTTCCTGCGCAAGGACAAGCTCACCGTTCCCGATCTCGCGGTCATCGTGCCCGCCATCTACAATTCCGAACTGGTCAAGAAGAACGCCACGCCGGACGATCCCTGGGGCCTCAACTACACCAAGCAGAACATCGCCGGCAGCGGCGCCTATAAGGTGAGCCGCTGGACGCCAGGCACAGAGGTGGTGCTCGACCGCAACGACGATTGGGCCAGCGGCCCGCTGCCGAAGATCAAGCGCGTGATCTGGCGCATGGTGCCGTCAGCCGGCAATCGGCGGGCGCTTCTGGAACGCGGCGATGCCGATGTTTCCTATGAATTGCCCAACAAGGATTTCGCCGAGCTGAAAGATTCCGGCAAGCTGTCCGTCGTCTCGACGCCATTCTCCAACGGCTGCCAATATCTTGGCATGAACGTCACCAAGCCGCCGTTCGACAATCTCAAGGTGCGGCAGGCGGTGGCCTATGCCATCCCCTATCAGAAGATCATGGACGCGGTGCTCTATGGCCTCGGCACCCCGCTGTTTGGCGCCACCACGCCGCCGCCGGCCGCCTGGCCGGTCGCCCATTCCTACAATCTCGACCTCGCCAAGGCACGGCAATTGATGAGCGAAGCGGGCTATCCCAGCGGATTCGAAACCACCTTGTCGTTCGACCTCGGCTTTGCCGTCGTCAACGAGCCGCTCTGCGTTCTGATCCAGGAAAGCCTCGCGCAGATCGGCATCAAGACGATCATCAACAAAGTGACGGGCGCCAATTGGCGCACCGAACTGAACAAGAAGGTGATGCCGCTCTACACCAACGTATTCTCGGGCTGGCTCGATTATCCGGAATATTTCTTCTTCTGGTGCTATCACGGCTCCAACTCCGTCTTTAACACCATGAGCTATCAGTCGCCGCAGATGGACGCGCTCATCGATGGCGCCCGCACGGCCGCGGCCAATGGCGACACCGCCGCTTATGAAAAGGACGTGAAGGGCTTTCTCGATCTCGCCTTCACCGACATCCCCCGCATCCCGCTGTTTCAGCCCTATTCCAACGTGGCGATGCAAAAGAACATCAGCGGCTACCAATACTGGTTCCACCGCCGGCTCGACTATCGCACCTTCGTCAAGGGTTGA
PROTEIN sequence
Length: 389
EKPEQFVVVDDNTVRVDFLRKDKLTVPDLAVIVPAIYNSELVKKNATPDDPWGLNYTKQNIAGSGAYKVSRWTPGTEVVLDRNDDWASGPLPKIKRVIWRMVPSAGNRRALLERGDADVSYELPNKDFAELKDSGKLSVVSTPFSNGCQYLGMNVTKPPFDNLKVRQAVAYAIPYQKIMDAVLYGLGTPLFGATTPPPAAWPVAHSYNLDLAKARQLMSEAGYPSGFETTLSFDLGFAVVNEPLCVLIQESLAQIGIKTIINKVTGANWRTELNKKVMPLYTNVFSGWLDYPEYFFFWCYHGSNSVFNTMSYQSPQMDALIDGARTAAANGDTAAYEKDVKGFLDLAFTDIPRIPLFQPYSNVAMQKNISGYQYWFHRRLDYRTFVKG*