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SCNpilot_expt_300_bf_scaffold_25295_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 2..1207

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P137_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 402.0
  • Bit_score: 740
  • Evalue 9.00e-211
PAS domain S-box protein {ECO:0000313|EMBL:EKS36292.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 4971 similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 402.0
  • Bit_score: 740
  • Evalue 1.30e-210
putative histidine kinase/response regulator similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 402.0
  • Bit_score: 649
  • Evalue 7.70e-184

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
GATCTCGATCTGCGAATGCGCAACGGCAAGACTATGCCGGTGCGGCTCTATCACAAGCTGGCCTTCGGCGCGGACGGTACGCCCGGCGCGTCGCGTACCCTGGTGATCAACCGCGCACGCGACGATCATGCCGATCCGCAGCGCGCGGCGGAAGTGCGCTTTATGCGCTTCTTCGATCACACGCCGATGGCGATCGCGACCGTGGACAAGTCGGGCAACATCGTGCGCGCCAACGCCCGCTTTGCGAAGCTGACGCAGTCATTGTCGCCGACAGGTGCCGCCAACAAGTCGATCTTCGCTGTCGTCAACGAACGCGATCGCGGAGAACTCGTCGCGGCGATCAACAAGGCCGCGGACGGGCAGGGCGACATTCCGCCGGTCGATGCGATGCTGGACAGCACGCGGGAGCGCTGGGGCCAGTTCTTCGTCACCTCGGTCGAGCAGGCGGCGGGAGACGCGGAAGCCGCCATCGTCTATCTGCTCGACATCACCGAAAAGCGCACGCTGGAGAACAGCTTCGCCCAGTCGCAGAAGATGCAGGCGGTGGGCCAGCTCGCCGGCGGCATCGCCCACGATTTCAACAACGTGCTCTCCGCCATCATGATGGCGAATGACTTCCTGCTCAACGCGCACAAGCCGACCGATCCGTCCTTCCAGGACATCATGCAGATTAAGCAGAACGCTAACCGCGCCGCGGCGCTGGTGCGGCAACTGCTGGCGTTCTCGCGCAAGCAGACGCTGCGTCCGCAGGTGCTCGACATCGGCGATGTGCTCTCCGACATCAACGTGCTGCTCAAGCGGCTGGTCGGCGAGAAGGTGAAGCCGGAATTCGTCTACGGCCGCGACCTGTGGCCGGTGAAGGCTGACCTGTCGCAATTCGAGCAGGTCATCGTCAATCTCGCGGTGAACGCGCGCGATGCGATGCCTGAAGGCGGCAAGCTCAGCATCCGCACCGCCAACGTCTCCGCGAAGGATATCGAGCGCGCCGAATATAAAGGCATGCCGGTGGCGGACTATGTCGGCATCGAGGTGACTGACACCGGCACCGGTATTCCCGCCGATATCGTGGACAAGATCTTCGAGCCGTTCTTCTCCACCAAGGAAGTCGGCAAGGGAACGGGCCTCGGCCTCTCCACGGTCTATGGCATCGTCAAGCAGACCGGCGGCTTCATCTATGTCGACTCGGTGCCGGATCGCGGCACCACG
PROTEIN sequence
Length: 402
DLDLRMRNGKTMPVRLYHKLAFGADGTPGASRTLVINRARDDHADPQRAAEVRFMRFFDHTPMAIATVDKSGNIVRANARFAKLTQSLSPTGAANKSIFAVVNERDRGELVAAINKAADGQGDIPPVDAMLDSTRERWGQFFVTSVEQAAGDAEAAIVYLLDITEKRTLENSFAQSQKMQAVGQLAGGIAHDFNNVLSAIMMANDFLLNAHKPTDPSFQDIMQIKQNANRAAALVRQLLAFSRKQTLRPQVLDIGDVLSDINVLLKRLVGEKVKPEFVYGRDLWPVKADLSQFEQVIVNLAVNARDAMPEGGKLSIRTANVSAKDIERAEYKGMPVADYVGIEVTDTGTGIPADIVDKIFEPFFSTKEVGKGTGLGLSTVYGIVKQTGGFIYVDSVPDRGTT