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SCNpilot_expt_300_bf_scaffold_26403_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(3..350)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: probable RuBisCO transcriptional regulator-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11FC2 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 229
  • Evalue 1.50e-57
Uncharacterized protein {ECO:0000313|EMBL:EKS32963.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 229
  • Evalue 2.10e-57
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 110.0
  • Bit_score: 145
  • Evalue 1.00e-32

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGCTGAATCTAGTATGGGTGCGGACATTTCTGGCCCTGGCGAAGCATAAGAGCTTTCAAGCGTCCGCAGAATATCTTCGGATCGCTCAGCCGACGGCCTCATCACATATCCAGAAGCTTGAGGAGCAGCTGGGTGTCCTGCTATTCCATCGCTCCCGAACGGGGTGCGAGCCGACGCGGGAAGCGATGAACTTTCTGCCTTATGCCCAGAGCATCCTTAGGGTTAACGAGCGTGCACTCGCCGCGGTCTCTGGGGAGCGCACGCGGATCGGTGCCAGTTCCAATATCGGAATCTATCTGCTGCAGCCCTATGTCCGGTCATATCTGGAAGGCCGCGATCCAGCGGCT
PROTEIN sequence
Length: 116
MLNLVWVRTFLALAKHKSFQASAEYLRIAQPTASSHIQKLEEQLGVLLFHRSRTGCEPTREAMNFLPYAQSILRVNERALAAVSGERTRIGASSNIGIYLLQPYVRSYLEGRDPAA