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SCNpilot_expt_300_bf_scaffold_34380_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..357

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAG9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 116.0
  • Bit_score: 201
  • Evalue 4.50e-49
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EFI50463.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 116.0
  • Bit_score: 201
  • Evalue 6.20e-49
rrm1; RNA methyltransferase TrmH group 3 similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 117.0
  • Bit_score: 200
  • Evalue 2.10e-49

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
GGGCACAGCCCGGAGGCGACCGGGGTGCTGGCGAAATCGGCGTCCGGCGCGCTCGAACTGGTGCCGCTGGTGCTGGTGCAGAATCTGGCCCGCGCGCTGACCGAACTGAAGGAGGAGGGCTTCCTCACCGTCGGGCTCGACAGCGAGGGCGGCGAAAATCTCGCCGCCGTGGAGCTGAAGGCGCCGCTCGCTCTGGTGCTCGGCGCCGAGGGCAAGGGCCTGCGCCAGCTCACGCGCGAGACCTGCAATGTGGTGGCGCGGCTCGACATGCCGGGCGAGATCAAGAGCCTCAACGTCTCCAATGCCACCGCGCTCGCCCTTTATATCGGCGCGAACCGGCTCGGCCTGATGGCGTAA
PROTEIN sequence
Length: 119
GHSPEATGVLAKSASGALELVPLVLVQNLARALTELKEEGFLTVGLDSEGGENLAAVELKAPLALVLGAEGKGLRQLTRETCNVVARLDMPGEIKSLNVSNATALALYIGANRLGLMA*