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SCNpilot_solid_1_scaffold_54_313

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 333353..334582

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2U105_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 403.0
  • Bit_score: 592
  • Evalue 4.00e-166
  • rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL84792.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 403.0
  • Bit_score: 592
  • Evalue 5.70e-166
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 405.0
  • Bit_score: 591
  • Evalue 2.50e-166

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGAACCCCCCCGTGGCCACCAGTGCCGCAACCGCGCTTGCTCCCGACCCCACACGCTACCGCGTGCTCGGCGCCATCAGCTTCACGCACATGCTCAACGACATGATCCAGTCGTTGATCCTGGCGATCTACCCGATCCTGAAGGGCGATTTCAACCTGAGCTTTCTGCAGATCGGCCTGATCACGCTGACCTACCAGCTCACCGCCTCGCTGCTGCAGCCGCTGATCGGCCTGTACACCGACAGGCACCCCAAGCCACATTCGCTGGCGTTTGGCATGGGCTCCACGCTGTGCGGCCTGCTGCTGCTCTCGGTGGCGCCGAACTTTGCCGTGATCCTGGTGGCGGCGGCGCTGGTGGGTACGGGCTCTTCGGTGTTCCACCCCGAATCCTCGCGCATCGCGCGCCTGGCTTCGGGCGGGCAGCATGGGCTGGCGCAGTCGATCTTCCAGGTGGGCGGCAATACCGGTTCGGCGCTCGGGCCGCTGCTGGCCGCCATCATCGTGCTGCCGCACGGCCAGGGTGCCATCGCCTGGTTTGCCGTGGCGGCGCTGGTGGCGATTGCGGTGCTCTGGCAGATCGGCAACTGGTACCGGCGCCAGTTCCTGGGCAGCGGCGCGCGCGCCAAAAAGGCGGTCGGCAGCGCAATGAGCCCTGTGCCGCCGAACGTGGTGCGCCGCGCCATCGGCGTGCTGCTGCTGCTCATTTTTTCGAAGTATTTCTACCTTACCAGCCTGACGAGTTACTACACCTTCTACCTGATCGAGCGCTTTGGCGTCTCGGTGCAGTCGGCGCAAATCCACCTCTTCGTCTTCCTCTTCGCCGTGGCGGCGGGCACGCTGGCCGGCGGGCCGATTGGCGACCGCATCGGGCGCAAGCCGGTGATCTGGGTCTCGATCCTGGGCGTGGCGCCTTTCACGCTGCTGCTGCCGCATGTGGGGCTGGTGTGGACGGGCATCCTGACCTTCATCATCGGCGTGGTCATCGCCTCGGCGTTCTCGGCCATCCTGGTCTATGCGCAGGAATTGATGCCCGGCAAGATCGGCGCCGTCTCCGGCCTGTTCTTCGGCTTTGCCTTCGGCATGGGCGGCGTGGGCGCGGCGGTGCTGGGCGTGCTGGCGGACAGCCGCGGCATCGAATTCGTCTACCAGATCTGCGCCTTCCTGCCGCTGCTGGGGCTGCTCACCATCTTCTTGCCGACCATCGAGCAGCCGCGCCGCAAGGTGAACTGA
PROTEIN sequence
Length: 410
MNPPVATSAATALAPDPTRYRVLGAISFTHMLNDMIQSLILAIYPILKGDFNLSFLQIGLITLTYQLTASLLQPLIGLYTDRHPKPHSLAFGMGSTLCGLLLLSVAPNFAVILVAAALVGTGSSVFHPESSRIARLASGGQHGLAQSIFQVGGNTGSALGPLLAAIIVLPHGQGAIAWFAVAALVAIAVLWQIGNWYRRQFLGSGARAKKAVGSAMSPVPPNVVRRAIGVLLLLIFSKYFYLTSLTSYYTFYLIERFGVSVQSAQIHLFVFLFAVAAGTLAGGPIGDRIGRKPVIWVSILGVAPFTLLLPHVGLVWTGILTFIIGVVIASAFSAILVYAQELMPGKIGAVSGLFFGFAFGMGGVGAAVLGVLADSRGIEFVYQICAFLPLLGLLTIFLPTIEQPRRKVN*