ggKbase home page

SCNpilot_solid_1_scaffold_104_52

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(62207..62671)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GN22_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 157.0
  • Bit_score: 110
  • Evalue 1.80e-21
Ligand-binding protein SH3 {ECO:0000313|EMBL:KIC92204.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 155.0
  • Bit_score: 116
  • Evalue 4.50e-23
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 153.0
  • Bit_score: 110
  • Evalue 5.00e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 465
ATGAGAACCGCGCTGGCAAATCTCCTCGCCACCCGCGATAATTACAAAGTCAGCATCCAGGCCGAAAATGGAAAACAATTATTGGATCAGATTGACATTCAGGGCCTGCCCGATATCATCCTTCTTGATATCAGCATGCCGGTGATGGATGGCTTTGAAATCATGTCCATACTTAAAAGAAGGTACAGGAATCCCAATGTGGTTGCAATTACAACGTATAATGATCACATGACCATATTAAGAATGACCGCTCTGGGAATAAATGGTTACCTGTTCAAAACCTCTGAACCGGAGGAAATTTTAACAACGCTTGATTCTGTCAAAAGAAATGGACAATACTTTTCAGAAGCGGTTCATGACAAACTTTTCCGGGCTTCAAAGAATGAACTGTATCGAAAGATCGGAACGATCAGGCAAAAAGAGCTTTCGTTTTTAAAGTACCTGTGCACCCAGAATGACATATAA
PROTEIN sequence
Length: 155
MRTALANLLATRDNYKVSIQAENGKQLLDQIDIQGLPDIILLDISMPVMDGFEIMSILKRRYRNPNVVAITTYNDHMTILRMTALGINGYLFKTSEPEEILTTLDSVKRNGQYFSEAVHDKLFRASKNELYRKIGTIRQKELSFLKYLCTQNDI*