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SCNpilot_solid_1_scaffold_156_16

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(16883..17572)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix type 11 domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV29_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 230.0
  • Bit_score: 279
  • Evalue 3.30e-72
DeoR family transcriptional regulator {ECO:0000313|EMBL:AHM60066.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 229.0
  • Bit_score: 282
  • Evalue 5.40e-73
helix-turn-helix type 11 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 230.0
  • Bit_score: 278
  • Evalue 2.00e-72

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Taxonomy

Flammeovirgaceae bacterium 311 → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 690
TTGAATCGAATTGACCGGCTCATGGCTATCTTAACCATGCTGCAATCTAAAAAGTTTATGCCCGCGGAACGCATCGCCGATAAGTTTTCAATAAGCATACGAACGGTGTACCGCGATGTAAAAGCGCTTACAGAAATTGGAGTACCGGTAAGTTTTGAAAACGGCCGGGGCTATTTTATTGTGCAAGGCTATTTTTTGCCGCCTGTATCATTCACCAATGAGGAAGCCAACGCACTGATACTAATGGAAAGCATTACCGCCCGGTTCTCTGATCAGTCTATCCAAAAGCACTACGAAACGGCATTAAACAAAATACGATCTGTGCTCCGCGGAAGCCAGAAAGAAAAACTGGAACAATTACAATCCCAGATAAAAACCGTTACCTGCGGGTTTGGTGGCAATAATTTCGCCTATTTATCTGAGATCCAGAATGCTATATCCGCCCAAACTATTCTTAATCTGGAATACCAAAACCTTAATGACGAGGTAAGCACCAGGGCAATAGAACCCATAGGCCTTGTTTTTTATGCTTTTAACTGGCATATGATTGCCTGGTGCTGGCGGCGTAATGCGTATCGTGATTTCAGGGTTTCCCGGATTTTGAAATTATCTGCCGAGGGAACCGCATTCCGAAAAAAGGATCATACAGATATTAATGAATACATGAAATTGCTGCCTGTTAATTACTAA
PROTEIN sequence
Length: 230
LNRIDRLMAILTMLQSKKFMPAERIADKFSISIRTVYRDVKALTEIGVPVSFENGRGYFIVQGYFLPPVSFTNEEANALILMESITARFSDQSIQKHYETALNKIRSVLRGSQKEKLEQLQSQIKTVTCGFGGNNFAYLSEIQNAISAQTILNLEYQNLNDEVSTRAIEPIGLVFYAFNWHMIAWCWRRNAYRDFRVSRILKLSAEGTAFRKKDHTDINEYMKLLPVNY*