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SCNpilot_solid_1_scaffold_62_73

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(84427..85035)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035F0028 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 185.0
  • Bit_score: 184
  • Evalue 1.30e-43
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 181.0
  • Bit_score: 179
  • Evalue 8.70e-43
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB38725.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma li similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 181.0
  • Bit_score: 179
  • Evalue 4.30e-42

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGTCTTTTGACGGCTCACGCGTTGTTTCTTCTGATGAAGAATTAATCCAGAATCTTCAGGAGAACAATTTGCTTAAAAGAAAAGCCGAGGACGCGTTATTTAATCGGTATATCTATTTTATAAAGGAAGGGATAAAAAAATATGCATTGCAGGAAGATGAATCTTTTGATGCGTATTCCGATACCATCCTGCATGCTATTGATAACATCAGAAAGGGATATTTTGAAAACCGGTCTGCACTTAAAACCTACCTGTATAGAATATTTATTAATAAATGTGTTGACGTTTTGCGAAAGAAGACGACCAATAGGAACAGTGTTCATAAAACTTCATCCATTTCGGATATGCTGATGTTAATGGCCGATTCAGCTAAAACAGTTGTTCAGCAGATAATTGAACGAACGGATATGGATGTCTTAAGCAATAAGTTGCAGGAGCTGAGCGAGAATTGCAGGAAGCTTTTAACATTGTTTGCCGATGGATACAGCGACAAGGAAGTGTCGGTATTACTGGAATATAAATCAGCGGATGTAGTTAAAACAAGCCGGTTGCGTTGCTTAGATAAACTGCGGATGTTGTATAACATTAAAAGAGATACAGATGGATAA
PROTEIN sequence
Length: 203
MSFDGSRVVSSDEELIQNLQENNLLKRKAEDALFNRYIYFIKEGIKKYALQEDESFDAYSDTILHAIDNIRKGYFENRSALKTYLYRIFINKCVDVLRKKTTNRNSVHKTSSISDMLMLMADSAKTVVQQIIERTDMDVLSNKLQELSENCRKLLTLFADGYSDKEVSVLLEYKSADVVKTSRLRCLDKLRMLYNIKRDTDG*