ggKbase home page

SCNpilot_solid_1_scaffold_186_10

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(9623..9985)

Top 3 Functional Annotations

Value Algorithm Source
HxlR family transcriptional regulator Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 120.0
  • Bit_score: 191
  • Evalue 5.00e-46
Transcriptional regulator, MarR family protein id=4527498 bin=GWA2_Flavobacterium_35_26 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 118.0
  • Bit_score: 176
  • Evalue 2.00e-41
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 114.0
  • Bit_score: 114
  • Evalue 1.60e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 363
ATGGTAACCACTAATTTTTCCCAAAGATTTATTGAAAACCCTCATGATTGCCCGGTAACGAGAGCAATGAGTATTATCGGTGGTAAATGGAAGCCAATTATTTTAAATTGTATAAGTAACAAGTCTGTTCGATTTGGAAAATTAAACCAACTCATTCCGGCTATATCCAATAAGGTATTGGCAAATGAACTTAAAGAATTGGAAGCCTATTCTTTGGTAAAAAGAAGTGAGTACAAAGAACTCCCTCCAAGAGTTGAATATGAATTAACCACAAAGGGAAAAAGTTTGATGCCAATTCTTCACGAGCTGGCAAAATGGGGGAATACAAATGTCGCCAGGAAAATTATTACGGAGGTACGGTAG
PROTEIN sequence
Length: 121
MVTTNFSQRFIENPHDCPVTRAMSIIGGKWKPIILNCISNKSVRFGKLNQLIPAISNKVLANELKELEAYSLVKRSEYKELPPRVEYELTTKGKSLMPILHELAKWGNTNVARKIITEVR*