ggKbase home page

SCNpilot_solid_1_scaffold_381_2

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 3391..4896

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-binding protein SusD n=1 Tax=Rudanella lutea RepID=UPI0003723165 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 502.0
  • Bit_score: 651
  • Evalue 9.00e-184
  • rbh
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 502.0
  • Bit_score: 646
  • Evalue 4.80e-183
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEI51834.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 502.0
  • Bit_score: 646
  • Evalue 2.40e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1506
ATGAAATATTTAATCGCGATAATCAGTTTGGTCTTTTGTTCAGCTCTTTTTTCGTGCAAAAAAGATTTTTTGAACAAAACAGACCCCACCAGAATTGGTACAGGAGTATTTTACCAGGATGCGGCCCAGGTAAACCGGGCTATTAACGGCATCTACGGCCAAATACAGGGTATTACCGGTGTTAATTACATTTTTAAAGAAATGATATCCGATAATACCACTATTGACCTCAACCCTTCCGACCGTGGCGGCGCCGCGGGATGGGAAGCTTTCGAATATTCTACCGTTAACTCAGGAAACGGAGAAATTTCGAATTTATGGAACAGGTACTACAGCGCCATGTACAATATTAATTTAAGCCTTGAAAAATTGGCGGAATCAACTATTGATGATGCGGCAAAAAAGCCTCTCGTTGGGGAGTTAAAATTTTTGCGTGCCTTCCTGTATTTTGACCTGGTGCGCTATTTTGGCAATGTTGTGCTGGTGACCAATACCTTTAAAACGCCGGACGAAGCTTTTGAGCTGGTGAGAACCGGATCGGTAGACCAGGTATATGCACTAATTGAAAGCGATCTTACTGACGCGGTTGCTTCACTTCCTGCCAAAGCAGATCAGCCTGCGGCGTTAAAAGGACGTGCCACAAAAGGGGCTGCGCTTGCAATGCTGGGAGAAATGTATTTAACCGTTAAAAAGTATCCGGAAGCGGTAAGTACGCTGCAGAGTATATTGTCAATGGGCTACAGTTTAATACCGGATTATGCGGATGTTTTCAGCACAGAGAATAAAAACAATGCAGAGTCTGTTTTTGAAATACAATACCAGGGCAATAATGATCTCGGCGAATGGAGCAACTTCATGTATGTATTTGCCCCAAGAGAATCATCCAGTTCCATCGTTGGCTTTGCCGGCCAGGGTTTGGGTGGACGCAATATTCCCACCAACAATATGATTGCCGCTTATGAGGCCGGAGATTTACGTAAAGATGTATCACTAAAAACCGGGTTTACAAAAAATGGCGTCTTTTATCCTATCCCTTATGTTAACAAATACAATCATGCGCATACGATTCCCGGCCGCACCAATGATAACTGGCCCATTTACAGGTATGCTGATGTATTGCTGATGCTGGCAGAGGCTATTAATGAAGCCACTGGCCCGGGTTCGGCTGAAGAATACCTGAACACGGTACGCGACAGGGCAGGACTTGATCCACTGAACGGGTTAAGCAAGGATGCTTTCAGAACCGCCGTACTCAAAGAAAGAAGGGTAGAGCTGGCATTTGAAAATCATCGCTGGTTTGATTTGAAAAGAACGATGACACCTGCAGAACTTGCTGCATTTATGAACGCGCATGGTGCGGAAGAAAAAGCAAACCCCACCGTTGCAAGAGGCGGTGTGGCTTTTAATAACTTAGATTATGTATACGAAGCCACTGAATACATTCTCCCCATCCCGGCCCCCCAAATACTGATCAATGACAAATTGGGCCAGAATGACGGGTACTAG
PROTEIN sequence
Length: 502
MKYLIAIISLVFCSALFSCKKDFLNKTDPTRIGTGVFYQDAAQVNRAINGIYGQIQGITGVNYIFKEMISDNTTIDLNPSDRGGAAGWEAFEYSTVNSGNGEISNLWNRYYSAMYNINLSLEKLAESTIDDAAKKPLVGELKFLRAFLYFDLVRYFGNVVLVTNTFKTPDEAFELVRTGSVDQVYALIESDLTDAVASLPAKADQPAALKGRATKGAALAMLGEMYLTVKKYPEAVSTLQSILSMGYSLIPDYADVFSTENKNNAESVFEIQYQGNNDLGEWSNFMYVFAPRESSSSIVGFAGQGLGGRNIPTNNMIAAYEAGDLRKDVSLKTGFTKNGVFYPIPYVNKYNHAHTIPGRTNDNWPIYRYADVLLMLAEAINEATGPGSAEEYLNTVRDRAGLDPLNGLSKDAFRTAVLKERRVELAFENHRWFDLKRTMTPAELAAFMNAHGAEEKANPTVARGGVAFNNLDYVYEATEYILPIPAPQILINDKLGQNDGY*