ggKbase home page

SCNpilot_solid_1_scaffold_262_43

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 41499..42368

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VBZ1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 289.0
  • Bit_score: 275
  • Evalue 4.50e-71
AraC family transcriptional regulator {ECO:0000313|EMBL:AHM60845.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 288.0
  • Bit_score: 304
  • Evalue 1.30e-79
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 288.0
  • Bit_score: 272
  • Evalue 1.40e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flammeovirgaceae bacterium 311 → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGAAATTCGCACTCCAAAAGTCTCCCATTCCCGAATCCAGAATATTTGTAGCAAAGCAGTTGAAAGAAAAACATTTTGACGCTACCTGGCATGCGCACAGTGAATACCAGGTGTTTTTGGTTTTAAAAGGAAGCGGTACCCGCTTTATAGGTAATACCGTTCAATCTTTTAATGCAGGAGATCTTACTTTTCTGGGGCCGGGTTTACCGCATTTATGGCGAAGCGATAGCGTATATTTTGATAAAAGCAGTAAACGCGCAACACTCGGATTGGTTGTTTATTTCCGGGCAGATTTTATAGGCGATCTGATAGAGAAGGATGAAATGCAGCAGGTCAGGAGCTTGTTTAAAAAGGCAAAAAGGGGCATTGAATATTACGGGCAAACGGTTTCTAAGCTTAGCAGTATGATGAACGGTATTGTGTCTGCGCATGGCGCAACCAGTCTCATACAATTGCTTCAGATGCTGGAGTTGATGGCGCAAACAAAAGAATACCGTTTGTTGCACAATGCTGACTACACTTACAAATTAAAAGAATCAGAAACCCGGCGCATCAATCTGGTGATTAATTTCGCAGCACAGCATTTCCGGGAGCGTATCGAATTGGAATCGGCTGCTGCATTACTCAATATGACGCCTACTTCATTCAGCCGCTATTTCAGGATGAAAACCAGCAAATCGTTTTCCGATTTTATTACAGAACTGCGCATCAGGCATGCCTGTAAATTATTGAGTGAAGAGGATGACAAAACCATTAGCCAGGTAAGTTATGAATGCGGGTTCAATACCTTGTCTAACTTTAACCGGCAGTTTAAATGGTATATGAAAATGACGCCAAAAACCTATCGCGGAAATTTTTCAACTTTGTAA
PROTEIN sequence
Length: 290
MKFALQKSPIPESRIFVAKQLKEKHFDATWHAHSEYQVFLVLKGSGTRFIGNTVQSFNAGDLTFLGPGLPHLWRSDSVYFDKSSKRATLGLVVYFRADFIGDLIEKDEMQQVRSLFKKAKRGIEYYGQTVSKLSSMMNGIVSAHGATSLIQLLQMLELMAQTKEYRLLHNADYTYKLKESETRRINLVINFAAQHFRERIELESAAALLNMTPTSFSRYFRMKTSKSFSDFITELRIRHACKLLSEEDDKTISQVSYECGFNTLSNFNRQFKWYMKMTPKTYRGNFSTL*