ggKbase home page

SCNpilot_solid_1_scaffold_490_21

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22164..22601)

Top 3 Functional Annotations

Value Algorithm Source
Heat shock protein Hsp20 n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9A5_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 145.0
  • Bit_score: 171
  • Evalue 4.60e-40
heat shock protein Hsp20 similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 145.0
  • Bit_score: 171
  • Evalue 1.30e-40
Heat shock protein Hsp20 {ECO:0000313|EMBL:ADY52455.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedo similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 145.0
  • Bit_score: 171
  • Evalue 6.50e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 438
ATGAGTAATATCATTAAAAGTGGAAGCCGCACACCGGACTCCTGGAATGATTTTTTTAATATGAACAATTTGTTCGACAATATGTGGCCCGACAGGTTGGGGAGGGGGTTTCCAGCGGTGAATATTTCAGAAACAGAAGCGGGCTATACCGTTGAAGTGGCAGCCCCTGGTTTTGAGAAAGGAGATTTTAAAGTAAAAGTGGATGATGATATACTAACGATCAGCGCGGAATCGAAAACTGAAAATGCATCGAACGATAAGCAAAGAGCATATACCCGCAGGGAGTATAGCTACAGTTCTTTTACGCGCAGTTTCAGGCTCCCCGATAACATAAAAGACGACAAAATTTCCGCAGGTTATAAAGACGGCATGCTGAAACTGGAATTGCCGAAATCGGCCACCCAGGTAAAAGCCACTAAAGAGATTACGGTAAATTAA
PROTEIN sequence
Length: 146
MSNIIKSGSRTPDSWNDFFNMNNLFDNMWPDRLGRGFPAVNISETEAGYTVEVAAPGFEKGDFKVKVDDDILTISAESKTENASNDKQRAYTRREYSYSSFTRSFRLPDNIKDDKISAGYKDGMLKLELPKSATQVKATKEITVN*