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SCNpilot_solid_1_scaffold_831_2

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 2102..2686

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FDF7_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 174.0
  • Bit_score: 119
  • Evalue 3.70e-24
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDB06966.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 174.0
  • Bit_score: 119
  • Evalue 5.10e-24
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 189.0
  • Bit_score: 106
  • Evalue 9.00e-21

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Taxonomy

Odoribacter splanchnicus CAG:14 → Odoribacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
TTGCGCCACGCAGCATCATATCATCCCGATGAGTATGCCATCGCTTTTCAAAATGGCGATGAAAGGGCGCTCTCCTACTTTTTCAATGAATTCTATTCCGCTCTTTGCATTTATGCCGCATACTACACACACAATGATGCTTCTGCGCAGGAGATTGTCGCCGATGCATTTGTAAAAACCTGGCAGCAAAGAAACCAGCTTTCCTCAGCTGGCTCTATCCGCGCTTACCTGTTCACCGTTGTACGGCACGATGCTATAAAATGGTACCAGAAAGAACATCGTGTTACCCGACTTTGGCTAAATGGTCAGGAGGAAAATACGGAGGCTGTTGAAGACAATGCCTTTGATATGATCGTAAGATCAGAAGTAGCCCGATACCTGCACCATGCATTAAATATACTGCCCCCCAAATGCAGGAAAATATTTCAATTGCTCTATATAGAAGGCAAGTCCATTCCGGAAATTGCGAAACAATTAAAGATAGCGCAAAGTACCGTTCGGGCTCAAAAACTACACGGGCTTGATGCACTCCGCAGGAAGATCCTATTTCCCTATCTGCTGATTATCTGCTTGCTGATAAAATAG
PROTEIN sequence
Length: 195
LRHAASYHPDEYAIAFQNGDERALSYFFNEFYSALCIYAAYYTHNDASAQEIVADAFVKTWQQRNQLSSAGSIRAYLFTVVRHDAIKWYQKEHRVTRLWLNGQEENTEAVEDNAFDMIVRSEVARYLHHALNILPPKCRKIFQLLYIEGKSIPEIAKQLKIAQSTVRAQKLHGLDALRRKILFPYLLIICLLIK*