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SCNpilot_solid_1_scaffold_855_3

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 1443..2021

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 172.0
  • Bit_score: 130
  • Evalue 2.00e-27
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 172.0
  • Bit_score: 130
  • Evalue 5.80e-28
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 172.0
  • Bit_score: 130
  • Evalue 2.90e-27

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
TTGCCATTCGATATTACGATATTGCTGCAGCAGGTGTCATGCGACGATGAAGCGGCCTTTCGCAGGGTCTTCGATCATTACAAAGCACCGTTTTACAGTGTTGCCTTTAAGATGACCCATACCGCAGGCATCGCTGAAGAAATTGTTCAGGAAGTTTTTGTTACGCTTTGGGTAAAAAGAAGATTAGCAGCCCGCGCAAAAAATCCGGAAGGCTATATTTTTACTATTCTTCATAACTGCATATACGCGCATTTCAGAAAGCTTGCGCAGGAAAGACAATTAAAATCAAAGATCGTGCAGGCCACAGAAGAGAGTGTAAATCCGGTAGAGACCTTATTACTCGAAAAAGAGCACAGGATCATTCTTGAAAAAGTGATCAGCGGGCTTCCTCCTCAGCAGAAGATCATTTACCAATTGGCCAAGCAGGAAGGAATAAGCAGGGAAGAGATTGCCAGGAGGTTAAACATTTCTCCTAATACCGTAAGGAATCATCTCGCCGCCGCGGTAGAATATCTGCGGGTTTGCCTTAAAAAGGAAGCCTCCGCTATTATATGGGCCGTTATCTGGATGTATGTATAA
PROTEIN sequence
Length: 193
LPFDITILLQQVSCDDEAAFRRVFDHYKAPFYSVAFKMTHTAGIAEEIVQEVFVTLWVKRRLAARAKNPEGYIFTILHNCIYAHFRKLAQERQLKSKIVQATEESVNPVETLLLEKEHRIILEKVISGLPPQQKIIYQLAKQEGISREEIARRLNISPNTVRNHLAAAVEYLRVCLKKEASAIIWAVIWMYV*