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SCNpilot_solid_1_scaffold_6788_4

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 3052..4686

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 532.0
  • Bit_score: 421
  • Evalue 3.60e-115
Choline dehydrogenase {ECO:0000313|EMBL:AEA23626.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AEA23626.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.; similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 532.0
  • Bit_score: 421
  • Evalue 1.80e-114
GMC oxidoreductase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AE62 similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 538.0
  • Bit_score: 439
  • Evalue 4.50e-120
  • rbh

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1635
ATGGAAAAAATTAAAGACAACGTTGCTAACATTGAGTACGACTATGTCATTATTGGCACTGGCGCCGGCGGCTCCGTTTTAGCTGATCGCCTTTCTGTAAATGGAAAATACAAAATATTGATACTTGAAGCAGGCGGCTCAGACGGCGATTTCATGCACGTGGTACCAAAGGGTTTTTACTTCACCATGCAGAATAAAAAGTACACCAAACATTATAAAACCGAAGCTTTCGGCGAAAACACGGTCGAAACCTGGCAACGTGGCTGGATCACGGGTGGCTCAACCACCATCAACGGTATGGTTTGGAACCGTGGCTGGGCAACAACTTATGATGCCTGGGAACAGGCTGGTAATAAAGGCTGGAATTTCAACAAATTTGTCGAAGCCTGGAAACAAATTGAAAATAACGAATTAGGACCCACCGAATTTCGTGGTGGCAATGGTCCGGTAAAGCTTGAAATTGCAAAGGCTGATAACAGCTTATCAAAAACCTTTATCAAAGCAGCAGAAAAAGCAGGAATCCCATTCGTAGAAGATATGAACTCCACAGGAGAAGACCGAATTGCCATCGTGATGTCGAACATACGCAACGGATTTAGACGCAGTGCATCAAAGACCTTTCTGGAAACCGCTCGTAAACGCAGTAACGTTACTATTATCAATCATGCAGAAGTTTTAAAAGTATTGATCGAAAACGGTCGCGCAGTGGGTGTTGCCTATATGCATAACGGCGCGCTTAAACAGCAACGGATCAATAAAGAAGTGCTTGTATGCGGCGGCACCCTCGAATCTCCGTTAATCTTGGAACGTTCAGGAATTGGCAGACGCGATGTTTTGGAAGCCGCCGGTATCGAAGTGATTGTAGAAAGTCCGCGAGTTGGTGAAAACCTATCGGAACATCGTGGCATTATGCTTCAATTTAAGTTCAATGGCCGCGTTGGATTTAACCATGAAATCAATACACCGCTTCGTCAACTCTGGGCAGGTTTTAAATATTTGCTGAATCGAAAAGGAGTTATCTCCTTTGGCGGTTATGATGTGTTGGGAATGTTCCGTTCAGATCCTGATTCTAAAGAGGTAGATACCCAACTATTCTTTACACCCGTTTCTACAGCAGGCTCTAATCCGCTTACAGGCGAAATGGTTGTTGATAAATTTTCAGGAGCAATGGCTATTGCCTATCCCGTAAATCCAACCAGTCGGGGATCCATCCATATTAGCGGCCCGAACCTCACCGACACACCCAAAATTGTTCCCAACTACTTAACAACGGAGCATGACCGGGATTTGGTTTTAAAAATTACACGCAAACTACGTGCTCTGATTGCTTCAGACGAGATGAAGGCTTTAGGTGCCGTAGAAATTCAACCGGGTCTGGATAAAATTAGTACCGACGAAGAAATTATAAACTACTCCATAAATCACGGTGCTTCCGGCTATCATACCCTTGGAACCTGTCGTATCGGACCTAACCAGGAAGATGTGGTAGATGACCGTTTGCGGGTTCGGGGTGTAACTGGACTTCGGGTGGTAGATGCATCGGTTTTTCCTGCTCAACCATCGGGCAACAACAATGCACCTACGCAGGCCGCCGCCTGGATTGCTGCCGGCATGATTTTAGAGGATGCCAATTAA
PROTEIN sequence
Length: 545
MEKIKDNVANIEYDYVIIGTGAGGSVLADRLSVNGKYKILILEAGGSDGDFMHVVPKGFYFTMQNKKYTKHYKTEAFGENTVETWQRGWITGGSTTINGMVWNRGWATTYDAWEQAGNKGWNFNKFVEAWKQIENNELGPTEFRGGNGPVKLEIAKADNSLSKTFIKAAEKAGIPFVEDMNSTGEDRIAIVMSNIRNGFRRSASKTFLETARKRSNVTIINHAEVLKVLIENGRAVGVAYMHNGALKQQRINKEVLVCGGTLESPLILERSGIGRRDVLEAAGIEVIVESPRVGENLSEHRGIMLQFKFNGRVGFNHEINTPLRQLWAGFKYLLNRKGVISFGGYDVLGMFRSDPDSKEVDTQLFFTPVSTAGSNPLTGEMVVDKFSGAMAIAYPVNPTSRGSIHISGPNLTDTPKIVPNYLTTEHDRDLVLKITRKLRALIASDEMKALGAVEIQPGLDKISTDEEIINYSINHGASGYHTLGTCRIGPNQEDVVDDRLRVRGVTGLRVVDASVFPAQPSGNNNAPTQAAAWIAAGMILEDAN*