ggKbase home page

SCNpilot_solid_1_scaffold_1_122

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(122491..123039)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 176.0
  • Bit_score: 260
  • Evalue 4.60e-67
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XQN1_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 178.0
  • Bit_score: 266
  • Evalue 2.30e-68
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KFJ93094.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 176.0
  • Bit_score: 269
  • Evalue 3.80e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. 1-7 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAAGGTGGTCGACACGGCCCTGCCCGGCGTGCGGCTGATCGAACCCCGGGTGTTCGGCGACGCGCGCGGCTTCTTCCTGGAATCCTTCAGCGCGCGCCGCTATCGGGACGAAGCGGGCATCGACCTGGATTTCGTGCAGGACAACGTGTCGCGCTCCGCGTACGGGGTCCTGCGCGGCCTGCACTTCCAGCGCCAACGCCCCCAGGGCAAGCTGATCCAGGTGATCGAGGGCGCCGTCTTCGACGTGGCGGTGGACATCGATCCGCGATCCGCGACCTTCGGGCGGCACGTCGCGGCCGAACTGTCGGCCGACAATCACCGCCAGATCTGGATCCCGCCCGGCTACGCGCACGGCTTCTGCGTCGTCAGCGAGTCGGCGGTCTTTCAGTACAAGTGCACGGATTACTACGATCCGGCCGACGAAGGCGGCCTGGCCTGGAATTGCCCGGACCTGGCGATCCCCTGGCCGGTGGCCGATCCCATCCTGTCGGACAAGGATCGCCGCCATCCGGGCTTGAAGGCCCTGGCGGCGCAGCGACTGCGTTGA
PROTEIN sequence
Length: 183
MKVVDTALPGVRLIEPRVFGDARGFFLESFSARRYRDEAGIDLDFVQDNVSRSAYGVLRGLHFQRQRPQGKLIQVIEGAVFDVAVDIDPRSATFGRHVAAELSADNHRQIWIPPGYAHGFCVVSESAVFQYKCTDYYDPADEGGLAWNCPDLAIPWPVADPILSDKDRRHPGLKALAAQRLR*