ggKbase home page

SCNpilot_solid_1_scaffold_1_470

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 478570..478974

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB3 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GML7_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 102.0
  • Bit_score: 184
  • Evalue 8.40e-44
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 133.0
  • Bit_score: 204
  • Evalue 2.20e-50
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) {ECO:0000313|EMBL:CDM25182.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 133.0
  • Bit_score: 204
  • Evalue 1.10e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGGTCACACACACCAGCAGCCCACGGCCTGGCCACCAGGATGCCACCGGCCAGACACCCGCCACCCACCAGAATCCCAACACCTACCCCGTGTTCAAGGGCCTGGGGCGCAAGGCCACCTTCATGGGCATTCCCACCACGCTCATGCTCGGGGCCTTTGTCTGCGTGGCGGTCATCGCCATGACGGCGGGTCTCGCCTGGTGGGGACTGCTCTTTGTGGTGATGCCAGCGCTGGCCATTGCCACCCGCGACGACGACAAGGCGCTGGACATTCTGTGGCTGGAGTTCAAGACCCGCCGCATGAACCGCAACCAGCGCTTCTGGCGCGGATCCAGCTACGCCACCCAGGACTATCACTGCGATCGACCCTGGCGCAGCCTCATTCACCGAAGGACTCACTCATGA
PROTEIN sequence
Length: 135
MVTHTSSPRPGHQDATGQTPATHQNPNTYPVFKGLGRKATFMGIPTTLMLGAFVCVAVIAMTAGLAWWGLLFVVMPALAIATRDDDKALDILWLEFKTRRMNRNQRFWRGSSYATQDYHCDRPWRSLIHRRTHS*