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SCNpilot_solid_1_scaffold_4_23

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 25539..26507

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQW9_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 300.0
  • Bit_score: 387
  • Evalue 1.20e-104
  • rbh
Hydrogen peroxide-inducible genes activator similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 322.0
  • Bit_score: 567
  • Evalue 3.10e-159
  • rbh
Hydrogen peroxide-inducible genes activator {ECO:0000313|EMBL:CDM23240.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 322.0
  • Bit_score: 567
  • Evalue 1.50e-158

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGGACATCAACCAGCTGAACTTCAAGCATTTGTTCTACTTCTGGCGCGTGGCGAAACAGGGTTCCCTCACCCACGCGGCGGAGCAGATCCATACTTCGCAGTCCGCCCTCTCCACGCAGATCAGACAGCTGGAGAACCGACTGGGAACGCCCCTGTTCGACCGCCAGGGACGCCACCTGGAACTCACCGCGACGGGCCAGCAGGTCTTCACCTATGCGGAAAACATCTTCGGGCTGGGCGAACAGATGCTGGGGTGGCTCGACGGCCGCGACGCCGGCGTCACCCGCGTGCGCGTGGGCAGCGTGTCGACCATGTCGCGCAACTTCCAGGTCAACTGGCTGCGCCCTCTGTTCCAGGACCCGACCATTCTGCTGTCCGTGGATTCCGGCCCCCTGCAGACGCTGATCGAACGCCTGCTGCGCCATCAGCTGGACGTGGTGCTGGCCAACGAGCCCGTCTCGTCCGATCCGACACGGCCGGTCTCGTCGCGTTTTCTCGGCAGCCAGGTCATCTCGCTGGTGGGCCGGTCCGACCGCTGGGCCGGCGCCACGCTGCAAGTCCCGGAAGATCTCGAAGACGTCGAAATGGCCATGCCCAGCACGCGCCACAACGTGCGCCTGCAGTTCGACGCCCTGTGCTTTTCCGCCGGCGTGCAGCCCAGGCTGCGCGCCGAGATCGACGACATGACCATGCTGCGCCTGATCGCGCGCGACAGCGGCTGGATCACGGTGCTGCCGGAAGTCGTCGTGCAGGACGAGCTGCACTCGGGCGAACTGGTGCACGTCGGCCAGTCCTCGCAGCTGACCGAACATTTCTACGCCATCACGGTCCAGCACGGCCATCTGGCGGGGCCCCTCAACCGGCTGCTGTCGCGCGCGGCGACCGGGGACATCCTGGGCGCAGCGCCACCCGAATCATCCGAATCCCTTCAACCGACAAGGACATCATCGTGTTCCCTCAACGACTGA
PROTEIN sequence
Length: 323
MDINQLNFKHLFYFWRVAKQGSLTHAAEQIHTSQSALSTQIRQLENRLGTPLFDRQGRHLELTATGQQVFTYAENIFGLGEQMLGWLDGRDAGVTRVRVGSVSTMSRNFQVNWLRPLFQDPTILLSVDSGPLQTLIERLLRHQLDVVLANEPVSSDPTRPVSSRFLGSQVISLVGRSDRWAGATLQVPEDLEDVEMAMPSTRHNVRLQFDALCFSAGVQPRLRAEIDDMTMLRLIARDSGWITVLPEVVVQDELHSGELVHVGQSSQLTEHFYAITVQHGHLAGPLNRLLSRAATGDILGAAPPESSESLQPTRTSSCSLND*