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SCNpilot_solid_1_scaffold_28_1

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(3..143)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=2 Tax=Bordetella holmesii RepID=M5NK18_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 101
  • Evalue 2.50e-19
LSU ribosomal protein L13p similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 101
  • Evalue 7.00e-20
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 101
  • Evalue 3.50e-19

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 141
ATGAAGACCTTTGTGGCCAAGCCGCATGAAGTCAAGCGTGACTGGTTTGTGATCGACGCCAAGGGCAAGGTCCTCGGCCGTGTGGCCAGCGAAGTCGCACGCCGTCTGCGTGGCAAGCACAAACCCGAATTCACGCCGCAC
PROTEIN sequence
Length: 47
MKTFVAKPHEVKRDWFVIDAKGKVLGRVASEVARRLRGKHKPEFTPH