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SCNpilot_solid_1_scaffold_77_68

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(81293..82996)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 567.0
  • Bit_score: 1033
  • Evalue 0.0
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 567.0
  • Bit_score: 1033
  • Evalue 0.0
  • rbh
2-isopropylmalate synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=LEU1_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 567.0
  • Bit_score: 931
  • Evalue 5.10e-268
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1704
ATGATCCAGAATCCCGCCTCCAAATACATTCCGTTCGCCCCGTTCACGCGCGACTACGCCGAACGCACCTGGCCCAGCCGCCGCACCACCACCCCGCCGATCTGGATGAGCACCGATCTGCGCGACGGCAACCAGGCCCTGATCGAACCCATGAGCGTGGACCGCAAGCTGCGGTTCTTCGATCAGCTGGTGAAAATCGGCTTCAAGGAAATCGAGGTCGGCTTCCCCTCGGCATCGCAGACCGACTACGATTTCGTGCGCAAGCTGGTCGATGAAAAGCGCATCCCCGACGACGTCACCATCATCGGCCTGACCCAGGCGCGCGGCGATCTGATCCCGCGCACGGTGCAGGCGCTGGCCGGGGCGAAGCACGCCATCGTGCACATGTACAACGCCTGCGCGCCGGCCTTCCGCAAGATCGTCTTCAACATGAGCCGCGACGAAGTCCGCGCCGTGGCCGTCGAAGGCACCCGGATCGTCAAGGCCGAAGTCGCCAAGCATCCGGAAACCCACTGGCGCTACGAATACTCCCCGGAGGTCTACAGCACCACCGAACCGGAATTCGCGCTGGAAGTCTGCAATGCCGTGGTCGATACCTGGCAGCCCACCGTCCAGGACAAGATCATCCTGAACCTGCCCGCCACCATCGAGGCCACCACCCCCAACCTGTACGCAGACCAGATCGAATGGATGCACCGCAATCTGGCCCAGCGCGACAAGATCGTGCTCAGCGTGCACCCGCACAATGACCGGGGCACGGCCGTGGCCGCCGCCGAATTCGCCGTCATGGCCGGCGCCGACCGCATCGAAGGCTGCCTGTTCGGCAACGGGGAACGCACCGGCAACGTCGACCTGGTCACGCTGGCCCTGAACCTGTACACCCAGGGCGTGCACCCCGGCCTGGATTTTTCCGACATCGACGAAGTGCGCCGCTGCGTGGAAGACTGCAACCAGCTGCCCGTCCACCCGCGCCACCCCTACGTGGGCGACCTGGTGTTCACGGCCTTCTCCGGTTCGCACCAAGACGCCATCAAAAAGGGCTTCGCCGTCCAGAAGGCCGACGCCGTCTGGGAAGTCCCGTACCTGCCAATCGACCCGGCCGACCTGGGCCGCAGCTACGACGCGGTCATCCGCGTCAACAGCCAGTCCGGCAAGGGCGGCGTGGCCTATCTGCTGGAACACGAACACGGCCTGGTCCTGCCGCGCCGCCTGCAGATCGAATTCAGCCGCGCCATTCAGCGCGTCACCGACGAAACCGGCCGCGAAGTCACGCCCAAGGACGTCTACGACATCTTTTCCAGCGAATACCTGGACCGCGAAACGCCCTGGAAGCTGGTGCGCCATCGCATCACCGGCAGCCCCAAGACCACCGGCCAGAAGCAGTTCATGATCGAAGTCGAGATCCAGGCGGACAAGCAGACCCGGCATCTGTCGGGCCAGGGCGACGGCGCGATTTCCGCCTTCGTGGACGCCCTGGGCATCGAGGCCCGCATCATGGATTACCAGGAACACGCCATCGGCACCGGCACGGACACCAAGGCCGCATCCTATGTGGAAATCCGCATCGGCGACGAAGCCAACGGCTATGGAGTCGGCATCCACGAGGACATCGTCACGTCGTCCTTCCTGGCCATCCTGAGCGCGGTCAATCGCTACGCGGCCTCCGGAAAGGATCTGCCTGCCCGCGTGTCGGCCGCCGCCTGA
PROTEIN sequence
Length: 568
MIQNPASKYIPFAPFTRDYAERTWPSRRTTTPPIWMSTDLRDGNQALIEPMSVDRKLRFFDQLVKIGFKEIEVGFPSASQTDYDFVRKLVDEKRIPDDVTIIGLTQARGDLIPRTVQALAGAKHAIVHMYNACAPAFRKIVFNMSRDEVRAVAVEGTRIVKAEVAKHPETHWRYEYSPEVYSTTEPEFALEVCNAVVDTWQPTVQDKIILNLPATIEATTPNLYADQIEWMHRNLAQRDKIVLSVHPHNDRGTAVAAAEFAVMAGADRIEGCLFGNGERTGNVDLVTLALNLYTQGVHPGLDFSDIDEVRRCVEDCNQLPVHPRHPYVGDLVFTAFSGSHQDAIKKGFAVQKADAVWEVPYLPIDPADLGRSYDAVIRVNSQSGKGGVAYLLEHEHGLVLPRRLQIEFSRAIQRVTDETGREVTPKDVYDIFSSEYLDRETPWKLVRHRITGSPKTTGQKQFMIEVEIQADKQTRHLSGQGDGAISAFVDALGIEARIMDYQEHAIGTGTDTKAASYVEIRIGDEANGYGVGIHEDIVTSSFLAILSAVNRYAASGKDLPARVSAAA*