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SCNpilot_solid_1_scaffold_77_87

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 104197..104793

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1437824 species="B similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 168.0
  • Bit_score: 212
  • Evalue 4.50e-52
Putative 2'-5' RNA ligase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNF3_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 180.0
  • Bit_score: 173
  • Evalue 2.80e-40
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 168.0
  • Bit_score: 212
  • Evalue 9.10e-53

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCTGGAATGCGGGATCCTGTGTCGGGGATCAGCGCTCGTGGGGAAATGGATGTCTGAACCGAGGATGGCTGTCCGTCGCCTGTTTTTCGCCCTCTGGCCCGATGCGGGCACGGTGGAGGAACTGGTCGGCTGGACCCGCCTGGCTCATGATGTCTGCGGCGGGCGCAGGATGCGGGCCGACACGCTGCATCTGACGCTGGCGTTCCTGGGCGCGGTCGAGGTCGACCGCGTCCCGGATCTGCTGGAGTTGCTGCGGGCGCCGCGCGGGCCGGGCGGCGCCCTGGCCCTGGACCGCTTCGGGCGGTTCCGGGGGCCGCGCATCGTCTGGGCGGGACCCTCGGCGGCGCCGTCGTGGCTGGCCGCCCTGCATCGATCCCTGTGGCGGGACCTGGCCGGCCTCGGCTTTCGCCGCCCCGAGGAATCGTTCCGCCCCCATGTGTCGCTGCTGCGCAAGGCCGGCGACGGCGAGCTGTCGGCCATCCCGCCGGCGCGGCCGATCATCTGGGATGCTCGCCGCCTGGTGCTGGTGGCTTCCGCCCCGCGCGAGACAGGGTCGTATTACCAGGCGCTGGGGGAATGCCGGCTGGCGGACTGA
PROTEIN sequence
Length: 199
MLECGILCRGSALVGKWMSEPRMAVRRLFFALWPDAGTVEELVGWTRLAHDVCGGRRMRADTLHLTLAFLGAVEVDRVPDLLELLRAPRGPGGALALDRFGRFRGPRIVWAGPSAAPSWLAALHRSLWRDLAGLGFRRPEESFRPHVSLLRKAGDGELSAIPPARPIIWDARRLVLVASAPRETGSYYQALGECRLAD*