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SCNpilot_solid_1_scaffold_97_21

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 28371..29495

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein involved in polysaccharide n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ILX9_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 368.0
  • Bit_score: 418
  • Evalue 5.60e-114
  • rbh
wza2; outer membrane protein involved in polysaccharide similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 368.0
  • Bit_score: 418
  • Evalue 1.60e-114
  • rbh
Outer membrane protein involved in polysaccharide {ECO:0000313|EMBL:CAP42640.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 368.0
  • Bit_score: 418
  • Evalue 7.90e-114

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
GTGATTAAACCTTTGCGACTTCTGGCATATCTGGCGATCTGTGGCGGCCTGTCGGGTTGCGCGAGTTCCTTTCTATCAGCGGCGGGGCCATCGATCCGCCAGATCCAGCACCAGGCTGAACCGGATCAGTCCGACGCCACGCCTCCGTACCAGTTGGTCGATTTGAACGCCCGGACCATCGCGCCCTACATGCGTCCGCCCGAACCTGAGCCCGTAGCCGCTGTGACGGAAAAACACATGCCCCAATTGCGTCTGGCGCCGGGTGACGTCATTCGCCTGATGGTGGCGGACACGGCGGCCGATGGCGGGATCTTCGCCCCGTTGAGTACCGGCGGCACGGTTTTCCAGCAATTGCGCGTCGAGGCTGACGGCCGACTGTCGCTGCCCTATGTGGGTCATATCAGTGTGGCCGGCCTGACGCCCTACGAAACTGAACGGCTGATCCGGCGCAGATTGAAAGGCGTGTCCGTGGATCCTCAGGTGCATGTCGCATTGACCGGAGATCGGTCCGGCGCCGTGTTGGTGGCCGGTGCAGTGAAAAACCCTGGTCGCGTATCCACCCTGGATGGCCCGTTGACCCTGCTGGATGCCATCAATCAGGCCGGCGGCGCAGTGCTGGAACCCTATCTGGTGCGTGTCACCTTGCGCACCGGCGACCATGCCGAGGTCTACAACTATCAGGATGTGCTGGAAGGCCGGAACCGCGTCATTCCGCCTGATTCCGAGGTCATTCTGGACCGCAATCGCCAGCGTTTCGTCGCCATGGGCGCCGTGGTGAAACCCGGCCTGCATGATTTCCCATCTCCGAATCCCAGTCTGTTGGAAGCCTTGGGCGTGGTCGGCGGCCTGCGCGACAGCACGTCCGACGCCACCGGGGTGTTTGTCTTTCGCCTGACCGATGCGCCGGCTGCGTCGAACACTGCGGTGCCTGCCCAGTCACAGGCACAAGTCTTCCGCCTGAATATGGCCGATCCCTCCGCTCTGTTCCTGGCGCGGCAGTTCCTGGTGCAGCCCGAAGACGCGATCTACGTCACGAACGCCGGCGTCTATGAATGGCAGAAGATCATTTCGCCGATTGTGCAGGTGCTGGTGCTCGGTCGTGCTGCGGATGCATTGGGGCGATAG
PROTEIN sequence
Length: 375
VIKPLRLLAYLAICGGLSGCASSFLSAAGPSIRQIQHQAEPDQSDATPPYQLVDLNARTIAPYMRPPEPEPVAAVTEKHMPQLRLAPGDVIRLMVADTAADGGIFAPLSTGGTVFQQLRVEADGRLSLPYVGHISVAGLTPYETERLIRRRLKGVSVDPQVHVALTGDRSGAVLVAGAVKNPGRVSTLDGPLTLLDAINQAGGAVLEPYLVRVTLRTGDHAEVYNYQDVLEGRNRVIPPDSEVILDRNRQRFVAMGAVVKPGLHDFPSPNPSLLEALGVVGGLRDSTSDATGVFVFRLTDAPAASNTAVPAQSQAQVFRLNMADPSALFLARQFLVQPEDAIYVTNAGVYEWQKIISPIVQVLVLGRAADALGR*