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SCNpilot_solid_1_scaffold_272_1

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 140..907

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HXN5_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 249.0
  • Bit_score: 436
  • Evalue 1.80e-119
LysR family transcriptional regulator {ECO:0000313|EMBL:ETM68525.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 249.0
  • Bit_score: 437
  • Evalue 1.50e-119
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 249.0
  • Bit_score: 430
  • Evalue 2.70e-118

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Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
TTGAAGATTCGCCTGCTCACGCGCACGACCCGCAGCGTTTCCCCCACTACGGCAGGCGAACGGCTTTTGAACGCCATCGGGCATCGCTTTGATGAGATCGAGTCAGAGCTGGACGACATCACGCAGATGCGCGACAAGCCAGCCGGGACGGTGCGAATCACCTGCGGAGACTACGTCTCACGGCACACGCTGCTGCCCAGGCTCGCGCCGCTGCTGCTTGAATACCCTGACGTCAAGATCGAGCTCGATGTGAACTACGGCTTTCGCGACATCGTGGCCGACCGCTTCGACGCCGGGGTTCGGCTGGGGGACACCATCGACAAGGACATGATCGCGCTGCCGATCGGGCCACCGCTTCGCATGGCGGTCGCAGCCTCCCCCGGCTATTTCAAGACACATCCCAAGCCCAAGCACCCGCGCGATCTGATGAACCATAGATGCATCAATATGCGGATGCAGTCCGGGGGCGGCCTCTTCGTCTGGGACTTCCAGCGCAAGGGCCAGCAGGTCAATGTTCGAGTGGAGGGTCAGCTCGTTATCAACACCTCGCCCACTATCGTGGATGCAGCCCTGGCGGGACTGGGGGTAGCGTGGTTACCCGACGGAGAATTCGACCCGCACATAGAGGAAGGACGTCTGGTGCGCGTATTGCAAGACTGGTGTGCTCCCTTTGCAGGGTACTACCTGTATTACCCCAGTCGTCGGCAACCCTCGCCAGCATTCTCGTTGGTGGTGGATGCCTTGCGCGATGAGATGGCGTACCGCTGA
PROTEIN sequence
Length: 256
LKIRLLTRTTRSVSPTTAGERLLNAIGHRFDEIESELDDITQMRDKPAGTVRITCGDYVSRHTLLPRLAPLLLEYPDVKIELDVNYGFRDIVADRFDAGVRLGDTIDKDMIALPIGPPLRMAVAASPGYFKTHPKPKHPRDLMNHRCINMRMQSGGGLFVWDFQRKGQQVNVRVEGQLVINTSPTIVDAALAGLGVAWLPDGEFDPHIEEGRLVRVLQDWCAPFAGYYLYYPSRRQPSPAFSLVVDALRDEMAYR*