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SCNpilot_solid_1_scaffold_167_34

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(37800..38174)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI00037AECCC similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 105.0
  • Bit_score: 64
  • Evalue 8.90e-08
Curli production assembly/transport component CsgF similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 128.0
  • Bit_score: 108
  • Evalue 2.00e-21
Curli production assembly/transport component CsgF {ECO:0000313|EMBL:CDM25911.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.; similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 128.0
  • Bit_score: 108
  • Evalue 9.80e-21

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGATTCACATGTTCCCAGCACCCGCGCGAGCGCGCCGCGCCTCGGAGCCGCACTGGCGTCCCTGGCGGCGATCCCGCTCCTGTCCGCATCGGCGCAGGCCGGCCAGTTGCTCTACACCCCCGTGAACCCGTCGTTCGGCGGCAACCCGCTCAACGGCCCGACCCTGCTGCAAAGCGCACAGGCCCAGAAGCGCTACCCCTACCCCATGGACGACCTGGGGATCGACAACATCGGCCAGATCCTGCAGACCAACAACGGCTTCCTGATCCAGCGGGGCAGCAAGCTGTACTGGGTGGATCTCAACGGAAACGCACACCCCATCAATCTGGATGGGTCCAGCACGACCAGCACGGCCGACGCGCCGATCAAATAA
PROTEIN sequence
Length: 125
MDSHVPSTRASAPRLGAALASLAAIPLLSASAQAGQLLYTPVNPSFGGNPLNGPTLLQSAQAQKRYPYPMDDLGIDNIGQILQTNNGFLIQRGSKLYWVDLNGNAHPINLDGSSTTSTADAPIK*