ggKbase home page

SCNpilot_solid_1_scaffold_167_50

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(52616..53440)

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase n=1 Tax=Pseudomonas extremaustralis RepID=UPI00028A0F9A similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 266.0
  • Bit_score: 289
  • Evalue 4.90e-75
Xylose isomerase domain-containing protein TIM barrel similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 269.0
  • Bit_score: 289
  • Evalue 1.10e-75
Uncharacterized protein {ECO:0000313|EMBL:AJE22815.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 269.0
  • Bit_score: 289
  • Evalue 5.30e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azotobacter chroococcum → Azotobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGAAACGCCGCTATTCACTGGCCCAGCTCACCACCCTGGAACTCGCCCCCCCCGCCATGATCAGCACAGCATACAGAACCGGCTACCAAGCGTGCGGCATCCGCCTGCTGCCAGTCAGTCCCGGCGGGGTCGGCTACCCGCTCATGGACGATCCAGCGCTGCTGAAGGAAACACTGGCCCGAATGGGCGATACCGGTGTCCGGATTGCCGATCTGGAAATCATCCGCCTCACCGATTCGTTCAATGTGGGGGATTACATGGCATTTTTTGAAGTAGGCCAGAAACTGGGGGCATCCAATATTCTGGTGGCCGGCAACGACACCCATGAAGCCCGCGCGACCGAATCCTTCGCCCGGCTCTGTGAAGCCTGCAAGCCGTACGGACTGACGGCCGACATCGAATTCATGCCTTGGCTACCCGTGGACCGAATCTCCGCAGCGCAACGCATCGTGGAAGCCGCCGGCCAGACCAACGGCGGAGTCCTGGTCGATCCTCTGCACTTCGCGCGTTCCGCCAGCACGCTGGACGAGCTCGCAGCCCTGCCCGGATCCATGATTCACTACGCGCAAATCTGCGACGCGCCGGCTGGCATCCCTTCCGAGACGTCAGATCTCATCCACGCAGCGCGCTGCGCCCGCCTGCCGACGGGTGAAGGCGGCATCGACCTGAAAGCGATCTTCGAACGGATCCCGCCAGAAACGCTCATCAGCGTGGAGATCCCCAACGACGAACTGCGCGCGGGCATGAGCGCCGAAGCCTGGGCGGAGCGCTGCCTCAGGACGTCGAAACAGCTGCTTGATCAGATCGACGCGGAGAACCGCTAG
PROTEIN sequence
Length: 275
MKRRYSLAQLTTLELAPPAMISTAYRTGYQACGIRLLPVSPGGVGYPLMDDPALLKETLARMGDTGVRIADLEIIRLTDSFNVGDYMAFFEVGQKLGASNILVAGNDTHEARATESFARLCEACKPYGLTADIEFMPWLPVDRISAAQRIVEAAGQTNGGVLVDPLHFARSASTLDELAALPGSMIHYAQICDAPAGIPSETSDLIHAARCARLPTGEGGIDLKAIFERIPPETLISVEIPNDELRAGMSAEAWAERCLRTSKQLLDQIDAENR*