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SCNpilot_solid_1_scaffold_531_25

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(25444..29703)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 999.99
  • Bit_score: 2656
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 999.99
  • Bit_score: 2656
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U8B0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 999.99
  • Bit_score: 2483
  • Evalue 0.0
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4260
ATGAAAGCGCTACTCGATCTCTTCAAGCAAGTCTCCCAAGACGAGCAATTCGACGCCATCCGCATCGGGATTGCTTCGCCCGAGAAGATCCGTTCGTGGTCTTTCGGCGAGGTCCGCAAGCCCGAGACCATCAACTACCGCACGTTCAAGCCCGAACGCGACGGCCTGTTCTGCGCCAAGATCTTCGGCCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCATCGCGGCGTCATCTGCGAAAAGTGCGGCGTCGAAGTCACGGTGGCGAAGGTCCGCCGCGAACGCATGGGCCACATCGAACTGGCCAGCCCGGTCGCGCACATCTGGTTCCTGAAGTCCCTGCCGTCGCGGCTGGGCATGGTGCTGGACATGACGCTGCGCGACATCGAGCGCGTGCTGTACTTTGAAGCCTGGTGCGTGATCGAACCCGGCATGACGCCGCTCAAGCGCGGCCAGATCATGTCCGACGACGACTACCTGTCCAAGACGGAAGAATACGGCGACGACTTCCACGCCCTGATGGGCGCGGAAGCCGTGCGCGAACTGCTGCGCACCATCGACATCGATTCCGAAGTCGAGAAACTGCGCGGCGAGCTCAAGGCCACGGGTTCCGACGCCAAGATCAAGAAGATCTCCAAGCGCCTGAAGGTCCTGGAAGGCTTCCAGAAGTCCGGCATCAAGCCCGACTGGATGATCATGGAAGTCCTGCCGGTGCTGCCGCCGGACCTGCGGCCCCTGGTGCCGCTGGACGGCGGGCGCTTCGCCACGTCCGATCTGAACGACCTGTACCGCCGCGTCATCAACCGCAACAACCGCCTGAAGCGCCTGCTGGAACTCAAGGCTCCGGACATCATCCTGCGCAACGAAAAGCGCATGCTGCAGGAATCCGTGGATTCGCTGCTGGACAACGGCCGCCGCGGCAAGGCCATGACCGGCGCCAACAAGCGCCAGCTGAAGTCCCTGGCCGACATGATCAAGGGCAAGAGCGGGCGCTTCCGTCAGAACCTGCTGGGCAAGCGCGTCGACTACTCCGGCCGTTCCGTGATCGTGGTGGGCCCGCAGCTGCGCCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGCTGGAACTGTTCAAGCCCTTCATTTTCAATCGTCTGGAAATGATGGGTCTGGCGACCACCATCAAGGCGGCGAAGAAACTGGTCGAGAGCCAGGAACCCGTCGTCTGGGACATCCTGGAAGAAGTCATTCGCGAACACCCGGTCATGCTGAACCGGGCGCCGACCCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCGCAGCTGATCGAAGGCAAGGCCATCCAGCTGCACCCGCTGGTCTGCGCGGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCCCTGGAAGCCCAGCTGGAAGCCCGCACCCTGATGCTGGCGTCCAACAACGTGCTGTTCCCGGCCAACGGCGAACCGGCCATCGTGCCGTCCCAGGACATCGTGCTGGGCCTGTACTATGCCTCGCGTGAACGCATCAACGGCAAGGGCGAGGGCATGTTCCTGGCCGACCTGGCCGAGGTCCAGCGCGCCTACGACAACCACGAAGTCGAGCTGCAGACCCGCATCACGACGCGCGTGCCGGAATACACCAAGGGCGAGGACGGCGAGTGGAAGCAGGAAGTCCACCGCTATCAGACCACGGTGGGCCGCGCGCTGCTGTCCGAGATCCTGCCGCAGGGCCTGCCGTTCACCGTGCTGAACAAGGCGCTGAAGAAGAAGGAAATCTCCAAGCTCATCAACATGTGCTATCGCCGTTGCGGCCTGCGGGCCACGGTGATCTTCGCCGACAAGCTGATGCAGTCCGGCTACCGCCTGGCCACCCGCGCGGGCGTGTCCATCGCCATGGGCGACATGGTGGTGCCCGACGCCAAGCGCGACATCCTGGCGCAGGCCTCCAGCGAAGTGAAGGAAATCGACCGCCAGTACTCCTCCGGTCTGGTCACCGCCCAGGAACGCTACAACAACGTGGTGGACATCTGGGGCAAGGCCGGCGACCGCGTGGGCAAGGCCATGATGGAACAGCTCTCCACCGAGCCGGTCATCGACCGCCACGGCAAGGAAGTGCGCCAGGAATCCTTCAATTCCATCTACATGATGGCCGACTCCGGCGCCCGGGGTTCCGCCGCCCAGATCCGCCAGCTGGCGGGGATGCGCGGCCTGATGGCCAAGCCGGACGGCTCCATCATCGAAACCCCGATCACGGCCAACTTCCGGGAAGGCCTGAACGTGCTGCAGTACTTCATCTCGACGCACGGCGCGCGTAAAGGCCTGGCCGACACGGCGCTGAAGACCGCCAACTCCGGTTACCTGACCCGCCGTCTGGTGGACGTGACCCAGGACCTGGTCATCACCGAGGACGATTGCGGCACCACGCACGGCTACGTGATGAAGGCCCTGCTGGAAGGCGGCGAAGTCGTCGAAGCCCTGCGCGACCGCGTGCTGGGCCGGGTGGCGGCCATCGACATCGTCAATCCGGACACTCAGGAAACCGTCATTCCGGCCGGCACGCTGCTGGACGAGAACAAGGTCGAACTGATCGACGAGCTGGGCATCGACGAAGTCAAGATCCGCACGCCGCTGACCTGCGAAACCCGCCATGGCCTGTGCGCCCATTGTTATGGGCGTGATCTGGGTCGCGGTTCCCTGGTCAACAAGGGCGAAGCGGTCGGCGTGATCGCCGCCCAGTCCATCGGCGAGCCGGGCACGCAGCTGACGATGCGGACCTTCCACATCGGCGGCGCGGCCTCGCGTTCGGCGCTGGCCAGCTCGATCGAGACCAAGTCCGCCGGTTCGGTGGGCTTCGCCATCGGCCTGCGCTACCTGACCAATGCCAAGGGCGACCGCATCGCGGTGTCGCGGTCCGGCGAAATCGTCGTCTATGACGACAACCGTCGCGAACGCGAACGCCACAAGGTTCCCTACGGCGCCACCATCCTGGTGGGCGACGGCGACACCATCAAGGCCGGCGCCAAGCTGGCTTCCTGGGATCCGCTGACCCGCCCGATCGTGTCCGAATACACCGGCACGATCCGCTTCGCCAACATCGAGGAAGGCGTGACCGTCGCCCGTCAGGTCGACGAAATCACGGGCCTGTCCACGCTGGTGGTGATCACGCCCAAGACGCGCAGCACCAAGGGCGCGGCGCGTCCGCAGATCCTGCTGCTGGACGAGCAGGGCCAGGAAATCAAGGTCGCCGGCACCGACCACGCCGTGGCGATCTCGTTGCCCGTGGGCGCCCTGATCACCGTGCGCGACGGCCAGGCCGTCGGCGTGGGCGACTTCCTGGCGCGGATTCCACAGGAATCGCAGAAGACCCGCGACATCACGGGCGGTCTGCCGCGCGTGGCCGAACTGTTCGAAGCCCGTTCCCCGAAGGACGCCGGCGTGCTGGCCGAAATCACCGGCACGGTGTCGTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGGTCATCACCGACATGGACGGCGTCAGCCACGAGTTCCTGATTTCCAAGGAAAAGCAGGTGCTGGTGCACGACGGCCAGGTGGTCAACAAGGGCGAACTGATCGTCGACGGTCCGGCCGACCCGCACGACATCCTGCGTCTGCAGGGCATCGAGCCGCTGGCCTCCTACGTGGTCAACGAAGTCCAGGACGTCTATCGTCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAAGTCATCGTGCGTCAGATGCTGCGTCGCGTGAACATCACCAATGCGGGCGATACGGAATTCATCACCGGCGAACAGGTTGAACGCGCCGAGCTGCTGAATGCCAACGACCGCATGGAAGCCGAGGGCAAGATCCCGGCCACGTACGACAACGTGCTGCTGGGGATCACCAAGGCCTCGCTGTCCACGGATTCGTTCATCTCCGCCGCTTCCTTCCAGGAAACGACCCGGGTGCTGACCGAAGCCGCCATCATGGGCAAGCGCGACGAACTGCGCGGCCTGAAGGAAAACGTCATCGTGGGTCGCCTGATCCCGGCGGGTACCGGTATGTCCTACCATATCGCCCGCCACGAAAAGGAGATCTTCGAGGCCGCCGAACGGGCCGCCGCGCGCGAGCTGGCCAATCCGTTCGCCGATCCTTCGGAAATGGCCCATGTGGGTACCGACGAGGCCGGCAGCGATGCCGACCCGGCTGCGGATTCGGATTCGCCGTCCGAAGAATAA
PROTEIN sequence
Length: 1420
MKALLDLFKQVSQDEQFDAIRIGIASPEKIRSWSFGEVRKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTVAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAWCVIEPGMTPLKRGQIMSDDDYLSKTEEYGDDFHALMGAEAVRELLRTIDIDSEVEKLRGELKATGSDAKIKKISKRLKVLEGFQKSGIKPDWMIMEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIILRNEKRMLQESVDSLLDNGRRGKAMTGANKRQLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPQLRLHQCGLPKLMALELFKPFIFNRLEMMGLATTIKAAKKLVESQEPVVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARTLMLASNNVLFPANGEPAIVPSQDIVLGLYYASRERINGKGEGMFLADLAEVQRAYDNHEVELQTRITTRVPEYTKGEDGEWKQEVHRYQTTVGRALLSEILPQGLPFTVLNKALKKKEISKLINMCYRRCGLRATVIFADKLMQSGYRLATRAGVSIAMGDMVVPDAKRDILAQASSEVKEIDRQYSSGLVTAQERYNNVVDIWGKAGDRVGKAMMEQLSTEPVIDRHGKEVRQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVITEDDCGTTHGYVMKALLEGGEVVEALRDRVLGRVAAIDIVNPDTQETVIPAGTLLDENKVELIDELGIDEVKIRTPLTCETRHGLCAHCYGRDLGRGSLVNKGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSALASSIETKSAGSVGFAIGLRYLTNAKGDRIAVSRSGEIVVYDDNRRERERHKVPYGATILVGDGDTIKAGAKLASWDPLTRPIVSEYTGTIRFANIEEGVTVARQVDEITGLSTLVVITPKTRSTKGAARPQILLLDEQGQEIKVAGTDHAVAISLPVGALITVRDGQAVGVGDFLARIPQESQKTRDITGGLPRVAELFEARSPKDAGVLAEITGTVSFGKDTKGKQRLVITDMDGVSHEFLISKEKQVLVHDGQVVNKGELIVDGPADPHDILRLQGIEPLASYVVNEVQDVYRLQGVKINDKHIEVIVRQMLRRVNITNAGDTEFITGEQVERAELLNANDRMEAEGKIPATYDNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMSYHIARHEKEIFEAAERAAARELANPFADPSEMAHVGTDEAGSDADPAADSDSPSEE*