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SCNpilot_solid_1_scaffold_750_13

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(10574..11521)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix protein, LysR family protein 178 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXI8_ACHXA similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 309.0
  • Bit_score: 259
  • Evalue 6.30e-66
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 312.0
  • Bit_score: 522
  • Evalue 6.60e-146
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM22699.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 312.0
  • Bit_score: 522
  • Evalue 3.30e-145

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGGTGTCGGACGATCACCTGTCGCGCATCCGCGAACTGAAGTTCAAGCAGCTGCTGGTGTTCGAGCGCGTGGCGACCCTGGGATCCATGCACAAGGCCGCCGAGGCCGTGCACATGACGCAGCCCAACGTGGTCAAGATCGTGCGCCAGCTGGAGGAGCTGCTGGACGTCGCCTTGTTCGAGCGCCACAGCAAGGGCGTCAGGCTGACGGTGTTCGCTGAACATCTGCTGACGCGCATCCGCCCCATGCTGGGCGATGTGCGCGCCATGAGCGAGGAACTGACGGCGCTGCGCGGCGGCGATGGCGGCCAGGTGGCCGTGGGCACGCTGATTTCCGCATCCGCCTGGCTGCTGCCCGAGAGCGCGGCGCTGATGAAGCGGCGCCACCCCAGGGTCGGCCTGGTGATCCGGGAAGCCACCAACGACATCCTGTTCCCCATGCTGCAGGTGGGCGAGCTGGACGTGATCGTGGGGCGCCTGCCCGAGGACCCCGGCGAAGGCGTGGAGATGCACGCCATCTACCAGGACGATCTGATGATCGTGGCCCGGGCCGGGCATCCGCTGTCCCGGCGGTCCGACTGCGCGGTGCGCGACCTGCTGGATTACCCCTGGATCGTGCCGTCCAATGCCTCTCCGGTGCGCAGGCAGGTGGACCAGTTCTTCCTGGACCGCGGGCTGCCCGTGCCCGACAATCAGATCGTGTCCTTGTCCATGCTGACCAATCTGGGAATCCTGGCTCGTTCCGATGCGCTGGCCATGCTGCCCAGCGTGGCCGCCCGTCCCCTGATCCAGGTGGGCGTGCTGTTCGAAGTCCCCATCCACGTGCGCCTGCCCTTCGGCGCGATCGGCTACAGCGTGCGGGCGGACCGTCCGCTGGTGCCCGCGGCGGAGACCTTCGTGCGGGTGCTCAAGGAAGTCGGCGCGCGGGCGCAGTCCGGGATTGCGTGA
PROTEIN sequence
Length: 316
MVSDDHLSRIRELKFKQLLVFERVATLGSMHKAAEAVHMTQPNVVKIVRQLEELLDVALFERHSKGVRLTVFAEHLLTRIRPMLGDVRAMSEELTALRGGDGGQVAVGTLISASAWLLPESAALMKRRHPRVGLVIREATNDILFPMLQVGELDVIVGRLPEDPGEGVEMHAIYQDDLMIVARAGHPLSRRSDCAVRDLLDYPWIVPSNASPVRRQVDQFFLDRGLPVPDNQIVSLSMLTNLGILARSDALAMLPSVAARPLIQVGVLFEVPIHVRLPFGAIGYSVRADRPLVPAAETFVRVLKEVGARAQSGIA*