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scnpilot_p_inoc_scaffold_2072_22

Organism: SCNpilot_P_inoc_Planctomycetes_unk

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: comp(11165..12175)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Pseudomonas brassicacearum (strain NFM421) RepID=F2K6Q9_PSEBN similarity UNIREF
DB: UNIREF100
  • Identity: 30.6
  • Coverage: 180.0
  • Bit_score: 67
  • Evalue 2.80e-08
Putative transcriptional regulator {ECO:0000313|EMBL:AEA71986.1}; TaxID=994484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom similarity UNIPROT
DB: UniProtKB
  • Identity: 30.6
  • Coverage: 180.0
  • Bit_score: 67
  • Evalue 4.00e-08
translation initiation factor IF-2 similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 163.0
  • Bit_score: 65
  • Evalue 3.10e-08

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Taxonomy

Pseudomonas brassicacearum → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATCGGCGTACGCGCTCAGGAAGTCAACCCGGACCCCCGCTCGGCTCCCCGTCAAATCTCCTTCGCCTTCCGGGCCGATCCCCTGGCCTTGGATGAAATGAAGCTCCCCAGGACGGCGCGCGACGTCTTCGGGCTTGTCCTGGACAACGCCCGCCTCCGCGGCGGCCGCTGCCGGCTGTCCAACGGGACCATGGCCCGCATCCTGGGATGCTGCGCCATGACGATCGGCCGCGCCCTGGTCGCCCTCGAAGCCGCCGGCCTGGTCCGTCGCGAATTGAGCCACGGCGGCCGGATCCGCTCCGGCATCCTGGTGACCTGGGATGGGGTTCAACAGGGATGTTTAACTGAACGTCCGTGCGTTCAACAGGAACGTGGAAGGGGTTCAACACCGGCGTTGAAGGGGGTTCAACAGCCGTGTGGCACTAACCAGAGCCCCCATCAGAGCGTGGACCAGACGGGCCCGATCCTCTCCTCTCAGGGGGGGGAAGACGATCCGGAAGCCGCCGCCCTGTTCGCAACCCTCGGCCCGGCCGCGTTCCTGCGGGCCATGATCGCCAAGGGTCGCGAGGAAGTCGCCGCCCGGTCGGCCGGGAAACCGGCCCCCTCCCCCGCACCGGCGGAACCCGCCAGGGCTTCCCAGGACGAGCCGGCGGCCCCGGCCCCGCCGATCCCCGCCCCGGTCGCCGATCGCCCCGCCACGGCCAAGCCAGGGGCCTTCCCCGAGACGCCTCGGCGCGTGGAGTCCCGCCCGACGTCTCGGACGGTCGTCCAGTCGCCTTCGATGTCCGCCCCCAAGCCTTCGGCCGCCCCGAACGCGCCACGCAGCTACTCCCCCGCCCCGGCGGTCCCGCCGGACGACGTCATGGCGATGGTGGCCCGGATGACGCGAGGGCTCGCCGAGGGGTTGAAGGCCGAGAACCTGGGACGTCGTCGAGTCGGGCCGAAGCGACTGGCCCAGCAGCTCGCTGAGGTCCGGAGACGGCACGGACGGGCGGATCGCCGGGATTGA
PROTEIN sequence
Length: 337
MIGVRAQEVNPDPRSAPRQISFAFRADPLALDEMKLPRTARDVFGLVLDNARLRGGRCRLSNGTMARILGCCAMTIGRALVALEAAGLVRRELSHGGRIRSGILVTWDGVQQGCLTERPCVQQERGRGSTPALKGVQQPCGTNQSPHQSVDQTGPILSSQGGEDDPEAAALFATLGPAAFLRAMIAKGREEVAARSAGKPAPSPAPAEPARASQDEPAAPAPPIPAPVADRPATAKPGAFPETPRRVESRPTSRTVVQSPSMSAPKPSAAPNAPRSYSPAPAVPPDDVMAMVARMTRGLAEGLKAENLGRRRVGPKRLAQQLAEVRRRHGRADRRD*