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scnpilot_p_inoc_scaffold_7707_2

Organism: SCNpilot_P_inoc_Planctomycetes_unk

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: 4325..4861

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_CPR15_01 UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 136.0
  • Bit_score: 58
  • Evalue 1.30e-05
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 171.0
  • Bit_score: 79
  • Evalue 1.40e-12

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Taxonomy

CG_CPR15_01 → CG_CPR15 → Bacteria

Sequences

DNA sequence
Length: 537
ATGTCTTCATGTCCCCGGCAGGGCGAACCTGACGGACTCGCCGCGTACGTCCCCCAGCTGCGCGCCAGGGCGCACGGCCTGATCGGGCCGAAGCTCAATCAATTCGTGGCGCCGTCCGACCTGCTCCAGGAGACGCTCCTCATCGCCGTGAGGAACTTCTCGGCGGTCTCGGGGCGGCCGAGTCGCCAGGTGCTCGCCTGGCTCAGCCAGGTCATGCGTCACCGGCTCTTGCGGCTCCTTCGCAAGCACCGCGGCGAGCTGGAGGGGACCGTCAAGGGCGCCCCGGGGATCGAGCCCCATGTCAGTTCTCGCGCTGCCCTCAGCCGGCTGGTCCTCAAAGAGTTGCGGGGGGAACTCCTGGCCGCGATCGACGCTCTCCCGGAGCCCGAACGGGCGGTGGTCGTCGCCCTCTACAAGGAAAGGGTGGGGACCGCGGAGATCGCCCAGCGGCTGGAAAGGACCGAAGGCGCGGTGCGGGCGATCCATCAACGCGCGGTCAAGCGGTTGAGGAGAAACCTGGAAGGATGGTCCCCTTGA
PROTEIN sequence
Length: 179
MSSCPRQGEPDGLAAYVPQLRARAHGLIGPKLNQFVAPSDLLQETLLIAVRNFSAVSGRPSRQVLAWLSQVMRHRLLRLLRKHRGELEGTVKGAPGIEPHVSSRAALSRLVLKELRGELLAAIDALPEPERAVVVALYKERVGTAEIAQRLERTEGAVRAIHQRAVKRLRRNLEGWSP*