ggKbase home page

08E140C01_scaffold_2596_curated_10

Organism: BJP_08E140C01_Hor_218_2013_Spirochaeta_53_29_curated

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 7359..7718

Top 3 Functional Annotations

Value Algorithm Source
toxin RelE n=1 Tax=Treponema primitia RepID=UPI0002555655 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 112.0
  • Bit_score: 175
  • Evalue 2.60e-41
Uncharacterized protein {ECO:0000313|EMBL:EHL72490.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 113.0
  • Bit_score: 142
  • Evalue 5.10e-31
Protein of unknown function (DUF1044). similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 110.0
  • Bit_score: 136
  • Evalue 4.30e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum sp. 4_3_54A2FAA → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
ATGCAGATCAATCGTGAATTTGTCATGATGCCGGAGTTCGATCACCAATGGGGGCGCCTTGGGCTTGGTGATGAGGAACTTCGACAGCTACAGGAAGAATTATTGGAGAATCCCAAGGCAGGCGCTGTGCTGAGAGGCACTGGAGGGCTTCGTAAATATCGGATTGCCTTTCCGGGTCGCGGTAAGAGCGGCGGTGGTCGAGTGGCATATGTTGATTTCACCGTACATGAAACAATCTACTTGATCACGGCATATCCAAAATCCGAGAAGGACAACCTAACGGGCAAAGAAAGGAATGAAATCGCGAAAGTGATTGCCGTTCTGGAAAAAGGTCTGCAGAAACAGGAGATAAGGAAATGA
PROTEIN sequence
Length: 120
MQINREFVMMPEFDHQWGRLGLGDEELRQLQEELLENPKAGAVLRGTGGLRKYRIAFPGRGKSGGGRVAYVDFTVHETIYLITAYPKSEKDNLTGKERNEIAKVIAVLEKGLQKQEIRK*