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bjp_ig2069_scaffold_947_curated_11

Organism: BJP_Ig2069_Hor_194_2014_Syntrophobacterales_46_30_curated

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(8790..9059)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 90.0
  • Bit_score: 113
  • Evalue 2.50e-22
rpoZ; DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 60.0
  • Bit_score: 67
  • Evalue 1.80e-09
DNA-directed RNA polymerase subunit omega id=4442540 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 91.0
  • Bit_score: 113
  • Evalue 1.20e-22

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCTAGAATTACAATCGAAGATTCTTTGCTGGTTGCCAAAACAAGGTTTGGCCTGGTGTCTCTGGCGTCTAAACGAGCTCACCAGTTACTGAAAGGTTCGGCGCCGCTGGTGGCGAGTAAAAACAGAGAAATAGTCGAGGCTTTGCGGGAGATTGCCGCGGGCAAGATCGTTTACGCCAATCCCGAATATTTAAACGGCACGAAAGAAGATTTTAAACCCATTCCGGATAATACTGAGTTTATCGGCGATGAAGAATATATCGAGTAA
PROTEIN sequence
Length: 90
MARITIEDSLLVAKTRFGLVSLASKRAHQLLKGSAPLVASKNREIVEALREIAAGKIVYANPEYLNGTKEDFKPIPDNTEFIGDEEYIE*