ggKbase home page

bjp_ig2103_scaffold_3_curated_500

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: 607579..607863

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 94.0
  • Bit_score: 138
  • Evalue 2.80e-30
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU98310.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 94.0
  • Bit_score: 138
  • Evalue 5.80e-30
transcriptional regulator, XRE family similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 93.0
  • Bit_score: 128
  • Evalue 9.20e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Faecalibacterium prausnitzii → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 285
GTGACTGAGTTTAAAAACTACCTTGACAAGCATATGAAAGACCCTGAATTCAAGGCAGAATACGATGCCCTTGAACCGGAATTTGCTATTATCCAGGCGATAATCGATGCCAGGAAAAATGCCGACCTGACCCAGAAAGAGCTTTCTGAACGAACCGGAATTACCCAGGCCGATATAAGCAAGCTTGAAAGCGGCAATGCAAACCCGTCTTTGAGAACTCTACGACGGCTCGCCAAAGCTCTCGGCATGCGGCTGAAACTCGAATTCATACCCGCAAAAAGCTGA
PROTEIN sequence
Length: 95
VTEFKNYLDKHMKDPEFKAEYDALEPEFAIIQAIIDARKNADLTQKELSERTGITQADISKLESGNANPSLRTLRRLAKALGMRLKLEFIPAKS*