ggKbase home page

MEL_A2_31_18

Organism: MEL.A2

partial RP 30 / 55 MC: 2 BSCG 32 / 51 ASCG 0 / 38
Location: comp(13708..13947)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 156
  • Evalue 1.50e-35
pta:HPL003_25400 RNA polymerase sigma factor rpod; K03086 RNA polymerase primary sigma factor alias=MEL_A1_C00001G01179 id=153159 tax=MEL_A1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes similarity UNIREF
DB: UNIREF90
  • Identity: 96.2
  • Coverage: null
  • Bit_score: 149
  • Evalue 5.50e-34
sigA; RNA polymerase sigma factor RpoD KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 79.0
  • Bit_score: 124
  • Evalue 1.30e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:813 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGTAGCTTCCGAATTATTAAAAGAAGATTTGGCAGAAGTTTTATGCACATTATCTCCTCGTGAACGTGATGTTTTAAGATTACGTTTCGGTATGGACGACGGACGTCAAAGAACTTTGGAAGAAGTTGGTCAATTGTTCGGTGTTACTCGTGAACGTATTAGACAAATTGAAGCTAAAGCTCTTAGAAAATTACGTCATCCAAATCGTAAAAAACGCTTGGAAGAATATGTTGAGTAA
PROTEIN sequence
Length: 80
MVASELLKEDLAEVLCTLSPRERDVLRLRFGMDDGRQRTLEEVGQLFGVTRERIRQIEAKALRKLRHPNRKKRLEEYVE*