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MEL_C2_11_17 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
32.5 169.0 98 1.60e-18 dji:CH75_10810
seg (db=Seg db_id=seg from=6 to=24) iprscan interpro
DB: Seg
null null null null dji:CH75_10810
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=1 to=161 evalue=3.3e-36 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698 iprscan interpro
DB: HMMTigr
null null null 3.30e-36 dji:CH75_10810
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=93 to=163 evalue=5.6e-15 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functi iprscan interpro
DB: superfamily
null null null 5.60e-15 dji:CH75_10810
(db=HMMPfam db_id=PF08281 from=105 to=157 evalue=5.6e-15 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 5.60e-15 dji:CH75_10810
(db=HMMPfam db_id=PF04542 from=24 to=68 evalue=2.8e-11 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 2.80e-11 dji:CH75_10810
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=3 to=91 evalue=6.9e-11 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor iprscan interpro
DB: superfamily
null null null 6.90e-11 dji:CH75_10810
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=2 to=69 evalue=9.2e-08) iprscan interpro
DB: Gene3D
null null null 9.20e-08 dji:CH75_10810
gp16_SPP1: putative phage head-tail adapt (db=HMMTigr db_id=TIGR01563 from=28 to=128 evalue=0.29 interpro_id=IPR008767 interpro_description=Bacteriophage SPP1, head-tail adaptor) iprscan interpro
DB: HMMTigr
null null null 2.90e-01 dji:CH75_10810
RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ51214.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" UNIPROT
DB: UniProtKB
100.0 165.0 325 5.20e-86 R5SJZ8_9GAMM