Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA polymerase sigma factor RpoE | similarity |
KEGG
DB: KEGG |
32.5 | 169.0 | 98 | 1.60e-18 | dji:CH75_10810 |
seg (db=Seg db_id=seg from=6 to=24) | iprscan |
interpro
DB: Seg |
null | null | null | null | dji:CH75_10810 |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=1 to=161 evalue=3.3e-36 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698 | iprscan |
interpro
DB: HMMTigr |
null | null | null | 3.30e-36 | dji:CH75_10810 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=93 to=163 evalue=5.6e-15 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functi | iprscan |
interpro
DB: superfamily |
null | null | null | 5.60e-15 | dji:CH75_10810 |
(db=HMMPfam db_id=PF08281 from=105 to=157 evalue=5.6e-15 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.60e-15 | dji:CH75_10810 |
(db=HMMPfam db_id=PF04542 from=24 to=68 evalue=2.8e-11 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.80e-11 | dji:CH75_10810 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=3 to=91 evalue=6.9e-11 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor | iprscan |
interpro
DB: superfamily |
null | null | null | 6.90e-11 | dji:CH75_10810 |
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=2 to=69 evalue=9.2e-08) | iprscan |
interpro
DB: Gene3D |
null | null | null | 9.20e-08 | dji:CH75_10810 |
gp16_SPP1: putative phage head-tail adapt (db=HMMTigr db_id=TIGR01563 from=28 to=128 evalue=0.29 interpro_id=IPR008767 interpro_description=Bacteriophage SPP1, head-tail adaptor) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.90e-01 | dji:CH75_10810 |
RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ51214.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" |
UNIPROT
DB: UniProtKB |
100.0 | 165.0 | 325 | 5.20e-86 | R5SJZ8_9GAMM |