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MEL_C2_1_20 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
coiled-coil (db=Coil db_id=coil from=290 to=311 evalue=NA) iprscan interpro
DB: Coil
null null null null
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=253 to=353 evalue=6.2e-10) iprscan interpro
DB: superfamily
null null null 6.20e-10
(db=HMMPfam db_id=PF00392 from=262 to=325 evalue=6.5e-10 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 6.50e-10
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=188 to=253 evalue=1.4e-08) iprscan interpro
DB: superfamily
null null null 1.40e-08
(db=HMMPfam db_id=PF00392 from=188 to=250 evalue=1.4e-08 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 1.40e-08
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=29 to=97 evalue=1.9e-08) iprscan interpro
DB: superfamily
null null null 1.90e-08
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=25 to=98 evalue=3.8e-07 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 3.80e-07
(db=HMMPfam db_id=PF00392 from=40 to=95 evalue=1.1e-06 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 1.10e-06
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=254 to=328 evalue=1.9e-06 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.90e-06
no description (db=HMMSmart db_id=SM00345 from=191 to=250 evalue=2.0e-06 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 2.00e-06
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=180 to=253 evalue=4.3e-06 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 4.30e-06
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=101 to=169 evalue=4.6e-06) iprscan interpro
DB: superfamily
null null null 4.60e-06
no description (db=HMMSmart db_id=SM00345 from=265 to=325 evalue=4.7e-06 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 4.70e-06
no description (db=HMMSmart db_id=SM00345 from=36 to=95 evalue=0.015 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 1.50e-02
no description (db=HMMSmart db_id=SM00345 from=114 to=171 evalue=1.1 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 1.10e+00
HTH_GNTR (db=ProfileScan db_id=PS50949 from=30 to=98 evalue=15.561 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 1.56e+01
HTH_GNTR (db=ProfileScan db_id=PS50949 from=259 to=328 evalue=16.246 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 1.62e+01
HTH_GNTR (db=ProfileScan db_id=PS50949 from=185 to=253 evalue=17.055 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 1.71e+01
Putative transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ51134.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; envir UNIPROT
DB: UniProtKB
99.4 354.0 703 1.50e-199 R5SJT6_9GAMM