ggKbase home page

MEL_C3_28_27

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: 27301..27657

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=43 to=59) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
EF_HAND_1 (db=PatternScan db_id=PS00018 from=92 to=104 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Type I dockerin domain (db=superfamily db_id=SSF63446 from=51 to=118 evalue=4.8e-10 interpro_id=IPR016134 interpro_description=Cellulosome enzyme, dockerin type I GO=Biological Process: polysaccharide catabolic process (GO:0000272)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.80e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus torques CAG:61 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
ATGGCATCTCCGAAAGAAGGTTATTCTGTGAAAAACTGGACGATTAACGGAGAAGTGTACAAAGAAAACGGTCAGGTTTATACTGGTACTACTATGAAATATGCGATTACAGCTTCATCAGGCATTGTAAAAGTCGAGTTTGTAAAAGATGAAGTTGAAGTTGTCAAAGGGGATGTAAACTTGAACGGAAAGGTTGAAATCGGCGATGTCCGTGAAGCCTTGAGAAGTATTTGTAAAAAGACACAACTGACAGAAACGCAGAAACAGGCGGGAGATATAAACAAAAACGGAACTGTTGATATCGAAGACTTGAGAACAATCCTGAGAGTTGTTTGCGGAAAAGTAGAAAGCCTGTAA
PROTEIN sequence
Length: 119
MASPKEGYSVKNWTINGEVYKENGQVYTGTTMKYAITASSGIVKVEFVKDEVEVVKGDVNLNGKVEIGDVREALRSICKKTQLTETQKQAGDINKNGTVDIEDLRTILRVVCGKVESL*